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Doctoral Assistant STI IEL LTS5

Dominique Zosso Signal Processing Laboratory 5 PhD nationality: CH web site: http://lts5www.epfl.ch/zosso.html office(s): ELD232 phone(s): [+41 21 69] 34622 fax: [+41 21 69] 37600 MISSION From 1/3/2007: PhD student at the Signal Processing Laboratory under the supervison of Prof. Jean-Philippe Thiran, in the domain of biomedical image processing. BIOGRAPHY Education 09/2007-present PhD thesis under the supervision of Prof. Jean-Philippe Thiran, in the field of biomedical image processing. Enrolled at the Doctoral School in Computer, Communication and Information Sciences, EDIC, at Swiss Federal Institute of Technology EPFL. 2003-2006 MSc in Electrical and Electronics Engineering, Swiss Federal Institute of Technology EPFL (Ing. él. dipl. EPF) Focus: Signal Processing, Electronics Final grade: 5.72 (1/4/2006), Prix de la commune de Chavannes Master's thesis An Approach to Multimodal Image Segmentation, at Telecommunications and Remote Sensing Laboratory, Catholic University of Louvain, Louvain-la-Neuve, Belgium. Directed by Prof. Benoît Macq, Prof. Jean-Philippe Thiran, Dr. Mathieu De Craene 10/2002-07/2003 Prediploma II (average grade 5.38) 10/2001-07/2002 Prediploma I (average grade 5.64) 08/1997-08/2001 Grammar school: Mathematisch Naturwissenschaftliches Gymnasium Bern-Kirchenfeld (final grade: 5.72) Meyer-Award for outstanding grades in science, Award of the Grammar school association. Employments 03/2007-present Research and teaching assistant at LTS5 with Prof. Jean-Philippe Thiran, Swiss Federal Institute of Technology Lausanne, EPFL 05/2006-01/2007 Scientific collaborator at the Structural Bioinformatics Group (Prof. Torsten Schwede, Dr. Michael Podvinec), Swiss Institute of Bioinformatics and Biozentrum, University of Basel. Grid-enabling open-source software for protein identification with tandem mass spectrometry. Integration in a web-based workspace environment for project submission and retrieval, and development of novel protein identification visualization tools. 2003-2005 Undergraduate teaching assistant, EPFL 1998-2001 Informatics assistant, Gymnasien Bern-Kirchenfeld Collegiate activities 10/2002–04/2006 Class representative Student delegate to the Section and Faculty Council. Involvement in EEE Section promotion. 10/2004 Organization and group leader of a study trip to Greece. Since 2003 Member of ADELE (Association des étudiants électriciens de l’EPFL) EEE students association at EPFL, 01/2004-11/2006 chairman Languages German native tongue French excellent English very good Computer Skills Desktop Word, Excel, Photoshop, Latex Programming Perl, C/C++, Matlab, Java, Pascal Web HTML, PHP, mySQL Other interests Scientific revues, climbing, hiking MAIN PUBLICATIONS V. Estellers Casas, D. Zosso, R. Lai, J.-P. Thiran, S. Osher, and X. Bresson. An Efficient Algorithm for Level Set Method Preserving Distance Function. IEEE Transactions on Image Processing, 2012. [ Details ] A. Kunze, A. Valero, D. Zosso, and P. Renaud. Synergistic NGF/B27 Gradients Position Synapses Heterogeneously in 3D Micropatterned Neural Cultures. Plos One, 6:-, 2011. [ DOI | Details ] A. Kunze, A. Valero, D. Zosso, and P. Renaud. Synergistic NGF/B27 Gradients Position Synapses Heterogeneously in 3D Micropatterned Neural Cultures. PLoS ONE, 6(10):e26187.1-12, 2011. [ DOI | Details | Full Text ] A. Kunze, A. Valero, D. Zosso, and P. Renaud. Synergistic NGF/B27 Gradients Position Synapses Heterogeneously in 3D Micropatterned Neural Cultures. PLoS ONE, 6(10):e26187, 2011. [ DOI | Details ] V. Estellers Casas, D. Zosso, R. Lai, J.-P. Thiran, S. Osher, and X. Bresson. An Efficient Algorithm for Level Set Method Preserving Distance Function. Technical report, 2011. [ Details ] D. Zosso and J.-P. Thiran. Geodesic Active Fields. PhD thesis, Lausanne, 2011. [ DOI | Details | Full Text | Link ] V. Estellers Casas, D. Zosso, X. Bresson, and J.-P. Thiran. Harmonic Active Contours for multichannel image segmentation. In Proceedings of International Conference on Image Processing, 2011. [ Details ] D. Zosso, X. Bresson, and J.-P. Thiran. Fast Geodesic Active Fields for Image Registration based on Splitting and Augmented Lagrangian Approaches. Technical report, 2011. Part of this work has been submitted to IEEE Transactions on Image Processing. This work has been supported by the National Competence Center in Biomedical Imaging (NCCBI). [ Details | Full Text ] D. Zosso, X. Bresson, and J.-P. Thiran. Geodesic Active Fields - A Geometric Framework for Image Registration. IEEE Transactions on Image Processing, 20(5):1300-1312, 2011. [ DOI | Details | Full Text ] D. Zosso, X. Bresson, and J.-P. Thiran. Geodesic Active Fields - A Geometric Framework for Image Registration. In Numerical Analysis And Applied Mathematics, Vols I-Iii, volume 1281 of AIP Conference Proceedings, pages 1027-1030. Amer Inst Physics, 2 Huntington Quadrangle, Ste 1No1 D, Melville, Ny 11747-4501 Usa, 2010. [ Details ] D. Zosso, X. Bresson, and J.-P. Thiran. Geodesic Active Fields - A Geometric Framework for Image Registration. In ICNAAM 2010: International Conference of Numerical Analysis and Applied Mathematics 2010, AIP conference proceedings, pages 1027-1030. Amer Inst Physics, 2 Huntington Quadrangle, Ste 1No1 D, Melville, Ny 11747-4501 Usa, 2010. Invited to the Session on "Geometric Models and Applications in Image and Surface Processing" at 8th ICNAAM conference. [ DOI | Details | Full Text ] D. Zosso and J.-P. Thiran. Geodesic Active Fields on the Sphere. In Pattern Recognition (ICPR), 2010 20th International Conference on, pages 4484 - 4487, 2010. [ DOI | Details | Full Text | Link ] D. Zosso, X. Bresson, and J.-P. Thiran. Geodesic Active Fields - A Geometric Framework for Image Registration. Technical report, 2010. This work was supported by the National Competence Centre in Biomedical Imaging (NCCBI). Parts of this report will be submitted to IEEE Transactions on Image Processing. [ Details | Full Text ] D. Zosso and J.-P. Thiran. A Scale-Space of Cortical Feature Maps. IEEE Signal Processing Letters, 16(10):873-876, 2009. [ DOI | Details | Full Text | Link ] D. Zosso and J.-P. Thiran. Beltrami-Flow to Generate a Scale-Space of Cortical Feature Maps on the Sphere. Technical report, 2009. Part of this work has been submitted to IEEE Signal Processing Letters. This work has been supported by the Swiss National Competence Center in Biomedical Imaging (NCCBI). [ Details | Full Text | Link ] D. Ferrario, M. Bach Cuadra, M. Schaer, N. Houhou, D. Zosso, S. Eliez, L. Guibaud, and J.-P. Thiran. Brain Surface Segmentation of Magnetic Resonance Images of the Fetus. In Proceedings of the 16th European Signal Processing Conference, EUSIPCO, Lausanne, Switzerland, 2008. [ Details | Link ] D. Zosso, B. Le Callennec, M. Bach Cuadra, K. Aminian, B. M. Jolles, and J.-P. Thiran. Bi-planar 2D-to-3D Registration in Fourier Domain for Stereoscopic X-Ray Motion Tracking. In Medical Imaging 2008: Image Processing, volume 6914 of Proceedings of SPIE, 2008. [ DOI | Details | Full Text | Link ] D. Zosso, M. Bach Cuadra, and J.-P. Thiran. Direct Fourier Tomographic Reconstruction Image-To-Image Filter. The Insight Journal, July-December, 2007. ITK Open Access / Open Review / Open Source Journal. [ DOI | Details | Full Text | Link ] D. Zosso, K. Arnold, T. Schwede, and M. Podvinec. SWISS-TANDEM: A Web-based Workspace for MS/MS Protein Identification on PC Grids. In CBMS'07, pages 406-411, Los Alamitos, CA, USA, 2007. IEEE Computer Society. Special Track 3 Computational Proteomics: Management and Analysis of Proteomics Data. [ DOI | Details | Full Text | Link ] D. Zosso, M. Podvinec, M. Müller, R. Aebersold, M. C. Peitsch, and T. Schwede. Tandem Mass Spectrometry Protein Identification on a PC Grid. In From Genes to Personalized HealthCare: Grid Solutions for the Life Sciences - Proceedings of HealthGrid 2007, volume 126 of Studies in HealthTechnology and Informatics, pages 3-12, Netherlands, 2007. IOS Press. [ Details | Full Text | Link ] D. Zosso, Q. Noirhomme, M. Davare, B. Macq, E. Olivier, J.-P. Thiran, and M. De Craene. Normalization of Transcranial Magnetic Stimulation Points by Means of Atlas Registration. In 14th European Signal Processing Conference EUSIPCO2006, 2006. [ Details | Full Text | Link ] D. Zosso. An Approach to Multimodal Image Segmentation. 2006. [ Details ] D. Zosso, X. Bresson, and J.-P. Thiran. Fast Geodesic Active Fields for Image Registration based on Splitting and Augmented Lagrangian Approaches. IEEE Transactions on Image Processing. [ DOI | Details ]

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