Marwan Abdellah
Spécialiste système
marwan.abdellah@epfl.ch +41 21 693 17 31 http://marwan-abdellah.com
Nationalité: Egyptian
Ingénieur senior de recherche en visualisation
EPFL BBP-CORE
Campus Biotech
Bâtiment B1
Ch. des Mines 9
1202 Genève
+41 21 693 17 31
Local:
B1 4 258.040
EPFL
>
VPA-AVP-CP
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BBP
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BBP-CORE
Web site: Site web: https://www.epfl.ch/research/domains/bluebrain/
Domaines de compétences
- Visualisation
- Rendu basé sur la physique
- Calcul haute performance
- Reconstruction de maillage tridimensionnel
- Neurosciences in silico
Biographie
Marwan Abdellah, né au Caire, Égypte. Il a obtenu son B.Sc. et M.Sc. diplômes en génie biomédical avec distinction avec distinction du département de génie biomédical de la Faculté d'ingénierie de l'Université du Caire en 2009 et 2012 respectivement. En 2011, il rejoint le Blue Brain Project à l'Ecole polytechnique fédérale (EPFL) et en 2017, il obtient son doctorat en neurosciences sous la direction de Henry Markram et Felix Schürmann.Formation
Ph.D. (Docteur ès Sciences)
Neurosciences
EPFL
09.2017
M.Sc.
Biomedical Engineering
Cairo University
02.2012
B.Sc.
Biomedical Engineering
Cairo University
07.2009
Publications
Sélection de publications
| Stefan Eilemann, Marwan Abdellah, Nicolas Antille, Ahmet Bilgili, Grigory Chevtchenko, Raphael Dumusc, Cyrille Favreau, Juan Hernando, Daniel Nachbaur, Pawel Podhajski, Jafet Villafranca, Felix Schürmann International Conference on High Performance Computing, Springer, Cham, 2017 |
From Big Data to Big Displays High-Performance Visualization at Blue Brain |
| Marwan Abdellah, Ahmet Bilgili, Stefan Eilemann, Henry Markram, Felix Schürmann arXiv preprint arXiv:1706.03024 |
A Physically Plausible Model for Rendering Highly Scattering Fluorescent Participating Media |
| Marwan Abdellah, Ahmet Bilgili, Stefan Eilemann, Julian Shillcock, Henry Markram, Felix Schürmann BMC Bioinformatics 2017 |
Bio-physically plausible visualization of highly scattering fluorescent neocortical models for in silico experimentation |
| Marwan Abdellah, Juan Hernando, Nicolas Antille, Stefan Eilemann, Henry Markram, Felix Schurmann BMC Bioinformatics 2017 |
Reconstruction and visualization of large-scale volumetric models of neocortical circuits for physically-plausible in silico optical studies |
| Marwan Abdellah, Asem Abdelaziz, Eslam Ali, Sherief Abdelaziz, Abdelrahman Sayed, Mohamed I Owis, Ayman Eldeib Engineering in Medicine and Biology Society (EMBC), 2016 IEEE 38th Annual International Conference of the |
Parallel generation of digitally reconstructed radiographs on heterogeneous multi-GPU workstations |
| Marwan Abdellah, Mohamed Abdallah, Mohamed Alzanati, Ayman Eldeib Engineering in Medicine and Biology Society (EMBC), 2016 IEEE 38th Annual International Conference of the |
Efficient rendering of digitally reconstructed radiographs on heterogeneous computing architectures using central slice theorem |
| Marwan Abdellah, Ahmet Bilgili, Stefan Eilemann, Henry Markram, Felix Schürmann
Proceedings of the 37th Annual Conference of the European Association for Computer Graphics: Posters |
Physically-based rendering of highly scattering fluorescent solutions using path tracing |
| Marwan Abdellah, Asem Abdelaziz, Ayman Eldeib
2016 IEEE 13th International Symposium on Biomedical Imaging (ISBI) |
Interactive high resolution reconstruction of 3D ultrasound volumes on the GPU |
| Marwan Abdellah, Yassin Amer, Ayman Eldeib
XIV Mediterranean Conference on Medical and Biological Engineering and Computing |
Optimized GPU-accelerated framework for x-ray rendering using k-space volume reconstruction |
| Henry Markram, Eilif Muller, Srikanth Ramaswamy, Michael W Reimann, Marwan Abdellah, Carlos Aguado Sanchez, Anastasia Ailamaki, Lidia Alonso-Nanclares, Nicolas Antille, Selim Arsever, Guy Antoine Atenekeng Kahou, Thomas K Berger, Ahmet Bilgili, Nenad Buncic, Athanassia Chalimourda, Giuseppe Chindemi, Jean-Denis Courcol, Fabien Delalondre, Vincent Delattre, Shaul Druckmann, Raphael Dumusc, James Dynes, Stefan Eilemann, Eyal Gal, Michael Emiel Gevaert, Jean-Pierre Ghobril, Albert Gidon, Joe W Graham, Anirudh Gupta, Valentin Haenel, Etay Hay, Thomas Heinis, Juan B Hernando, Michael Hines, Lida Kanari, Daniel Keller, John Kenyon, Georges Khazen, Yihwa Kim, James G King, Zoltan Kisvarday, Pramod Kumbhar, Sébastien Lasserre, Jean-Vincent Le Bé, Bruno RC Magalhães, Angel Merchán-Pérez, Julie Meystre, Benjamin Roy Morrice, Jeffrey Muller, Alberto Muñoz-Céspedes, Shruti Muralidhar, Keerthan Muthurasa, Daniel Nachbaur, Taylor H Newton, Max Nolte, Aleksandr Ovcharenko, Juan Palacios, Luis Pastor, Rodrigo Perin, Rajnish Ranjan, Imad Riachi, José-Rodrigo Rodríguez, Juan Luis Riquelme, Christian Rössert, Konstantinos Sfyrakis, Ying Shi, Julian C Shillcock, Gilad Silberberg, Ricardo Silva, Farhan Tauheed, Martin Telefont, Maria Toledo-Rodriguez, Thomas Tränkler, Werner Van Geit, Jafet Villafranca Díaz, Richard Walker, Yun Wang, Stefano M Zaninetta, Javier DeFelipe, Sean L Hill, Idan Segev, Felix Schürmann Cell 2015 |
Reconstruction and simulation of neocortical microcircuitry |
| Marwan Abdellah, Ayman Eldeib, Mohamed I Owis
Engineering in Medicine and Biology Society (EMBC), 2015 37th Annual International Conference of the IEEE |
GPU acceleration for digitally reconstructed radiographs using bindless texture objects and CUDA/OpenGL interoperability |
| Marwan Abdellah, Ayman Eldeib, Mohamed I Owis
Engineering in Medicine and Biology Society (EMBC), 2015 37th Annual International Conference of the IEEE |
Accelerating DRR generation using Fourier slice theorem on the GPU |
| Marwan Abdellah, Ahmet Bilgili, Stefan Eilemann, Henry Markram, Felix Schürmann
BMC Bioinformatics 2015 |
Physically-based in silico light sheet microscopy for visualizing fluorescent brain models |
| Marwan Abdellah, Ahmet Bilgili, Stefan Eilemann, Henry Markram, Felix Schürmann
The European Association for Computer Graphics (Eurographics) 2015 |
A Computational Model of Light-Sheet Fluorescence Microscopy using Physically-based Rendering |
| Marwan Abdellah, Rolf Gruetter
2015 |
Computational Models and Simulators of functional MRI |
| Srikanth Ramaswamy, Jean-Denis Courcol, Marwan Abdellah, Stanislaw R Adaszewski, Nicolas Antille, Selim Arsever, Guy Atenekeng, Ahmet Bilgili, Yury Brukau, Athanassia Chalimourda, Giuseppe Chindemi, Fabien Delalondre, Raphael Dumusc, Stefan Eilemann, Michael Emiel Gevaert, Padraig Gleeson, Joe W Graham, Juan B Hernando, Lida Kanari, Yury Katkov, Daniel Keller, James G King, Rajnish Ranjan, Michael W Reimann, Christian Rössert, Ying Shi, Julian C Shillcock, Martin Telefont, Werner Van Geit, Jafet Villafranca Diaz, Richard Walker, Yun Wang, Stefano M Zaninetta, Javier DeFelipe, Sean L Hill, Jeffrey Muller, Idan Segev, Felix Schürmann, Eilif B Muller, Henry Markram
Frontiers in neural circuits, Volume 9, 2015 |
The neocortical microcircuit collaboration portal: a resource for rat somatosensory cortex |
| Marwan Abdellah, Ayman Eldeib, Amr Sharawi
International Journal of Biomedical Imaging, 2015 |
High Performance GPU-based Fourier Volume Rendering |
| Marwan Abdellah, Ayman Eldeib, Amr Sharawi
Biomedical Engineering Conference (CIBEC), 2014 Cairo International |
Matlab-based Fourier volume rendering framework |
| Marwan Abdellah, Ayman Eldeib, Amr Sharawi
Biomedical Engineering Conference (CIBEC), 2014 Cairo International |
Offline Large Scale Fourier Volume Rendering on Low-end Hardware |
| Marwan Abdellah
Proceedings of the High Performance Computing Symposium, Society for Computer Simulation International |
cufftShift: High Performance CUDA-accelerated FFT-Shift Library |
| Marwan Abdellah, Saleh Saleh, Ayman Eldeib, Amr Shaarawi
Biomedical Engineering Conference (CIBEC), 2012 Cairo International |
High Performance Multi-dimensional (2D/3D) FFT-Shift Implementation on Graphics Processing Units (GPUs) |
| Salah Saleh, Marwan Abdellah, Ahmed A Abdel Raouf, Yasser M Kadah
Biomedical Engineering Conference (CIBEC), 2012 Cairo International |
High performance cuda-based implementation for the 2d version of the maximum subarray problem (msp) |
| Marwan Abdellah M.Sc. Thesis, Cairo University, 2012 |
High performance Fourier volume rendering on graphics processing units |
| Marwan Abdellah, Ayman Eldeib, Amr Shaarawi
Biomedical Engineering Conference (CIBEC), 2012 Cairo International. IEEE |
Constructing a Functional Fourier Volume Rendering Pipeline on Heterogeneous Platforms |
| Stefan Eilemann, Ahmet Bilgili, Marwan Abdellah, Juan Hernando, Maxim Makhinya, Renato Pajarola, Felix Schürmann
Eurographics Symposium on Parallel Graphics and Visualization |
Parallel rendering on hybrid multi-gpu clusters |
| Ahmed F Elnokrashy, Ahmed A Elmalky, Tamer M Hosny, Marwan Abd Ellah, Alaa Megawer, Abobakr Elsebai, Abou-Bakr M Youssef, Yasser M Kadah
Ultrasonics Symposium (IUS), 2009 IEEE International |
GPU-based reconstruction and display for 4D ultrasound data |
| Marwan M Abd Ellah, Megawer Alaa'A, Yasser M Kadah
Radio Science Conference, 2009. NRSC 2009. National |
Software development for low cost, high quality, real-time 4D ultrasound imaging system on personal computers (PCs) |