Profile picture
Données administratives

Julian Charles Shillcock

julian.shillcock@epfl.ch +41 21 693 96 79 https://www.epfl.ch/labs/lashuel-lab/computational-modelling-within-lmnn/

Nationalité: British

Expertise

Physics
Biophysics
Mesoscale simulations of soft matter

Prix et distinctions

Pour l'excellence de son enseignement

2021

A Versatile Approach to Stabilize Liquid-Liquid Interfaces using Surfactant Self-Assembly

H. Honaryar; S. Amirfattahi; D. Nguyen; K. Kim; J. C. Shillcock  et al.

Small. 2024-06-14. DOI : 10.1002/smll.202403013.

Detailed record

View at publisher

POETS: An Event-driven Approach to Dissipative Particle Dynamics

A. D. Brown; J. R. Beaumont; D. B. Thomas; J. C. Shillcock; M. F. Naylor  et al.

Acm Transactions On Parallel Computing. 2023-06-01. DOI : 10.1145/3580372.

Detailed record

Full text – View at publisher

Macromolecular Crowding Is Surprisingly Unable to Deform the Structure of a Model Biomolecular Condensate

J. C. Shillcock; D. B. Thomas; J. H. Ipsen; A. D. Brown

Biology-Basel. 2023-02-01. DOI : 10.3390/biology12020181.

Detailed record

Full text – View at publisher

Model biomolecular condensates have heterogeneous structure quantitatively dependent on the interaction profile of their constituent macromolecules

J. C. Shillcock; C. Lagisquet; J. Alexandre; L. Vuillon; J. H. Ipsen

Soft Matter. 2022-08-25. DOI : 10.1039/d2sm00387b.

Detailed record

Full text – View at publisher

Computational synthesis of cortical dendritic morphologies

L. Kanari; H. Dictus; A. Chalimourda; A. Arnaudon; W. Van Geit  et al.

Cell Reports. 2022-04-05. DOI : 10.1016/j.celrep.2022.110586.

Detailed record

Full text – View at publisher

Investigating the morphological transitions in an associative surfactant ternary system

H. Honaryar; J. A. LaNasa; R. J. Hickey; J. C. Shillcock; Z. Niroobakhsh

Soft Matter. 2022-03-07. DOI : 10.1039/d1sm01668g.

Detailed record

View at publisher

Coupling Bulk Phase Separation of Disordered Proteins to Membrane Domain Formation in Molecular Simulations on a Bespoke Compute Fabric

J. C. Shillcock; D. B. Thomas; J. R. Beaumont; G. M. Bragg; M. L. Vousden  et al.

Membranes. 2022-01-01. DOI : 10.3390/membranes12010017.

Detailed record

Full text – View at publisher

Non-monotonic fibril surface occlusion by GFP tags from coarse-grained molecular simulations

J. C. Shillcock; J. Hastings; N. Riguet; H. A. Lashuel

Computational and Structural Biotechnology Journal. 2022. DOI : 10.1016/j.csbj.2021.12.017.

Detailed record

Full text – View at publisher

Computational Approaches to Explore Bacterial Toxin Entry into the Host Cell

W. Pezeshkian; J. C. Shillcock; J. H. Ipsen

Toxins. 2021-06-28. DOI : 10.3390/toxins13070449.

Detailed record

Full text – View at publisher

Phase behaviour and structure of a model biomolecular condensate

J. C. Shillcock; M. Brochut; E. Chenais; J. H. Ipsen

Soft Matter. 2020-07-21. DOI : 10.1039/d0sm00813c.

Detailed record

View at publisher

Characterization of Protein-Membrane Interfaces through a Synergistic Computational-Experimental Approach

A. Prunotto

Lausanne, EPFL, 2020. DOI : 10.5075/epfl-thesis-7278.

Detailed record

Full text – View at publisher

Correction to Mechanism of Shiga Toxin Clustering on Membranes

W. Pezeshkian; H. Gao; S. Arumugam; U. Becken; P. Bassereau  et al.

ACS NANO. 2018. DOI : 10.1021/acsnano.8b00537.

Detailed record

View at publisher

A Topological Representation of Branching Neuronal Morphologies

L. Kanari; P. Dlotko; M. Scolamiero; R. Levi; J. Shillcock  et al.

NEUROINFORMATICS. 2018. DOI : 10.1007/s12021-017-9341-1.

Detailed record

Full text – View at publisher

Clustering on Membranes: Fluctuations and More

L. Johannes; W. Pezeshkian; J. H. Ipsen; J. C. Shillcock

Trends in Cell Biology. 2018. DOI : 10.1016/j.tcb.2018.01.009.

Detailed record

View at publisher

Neuronal morphologies: the shapes of thoughts

L. Kanari

Lausanne, EPFL, 2018. DOI : 10.5075/epfl-thesis-8255.

Detailed record

Full text – View at publisher

Bio-physically plausible visualization of highly scattering fluorescent neocortical models for in silico experimentation

M. Abdellah; A. Bilgili; S. Eilemann; J. Shillcock; H. Markram  et al.

Bmc Bioinformatics. 2017. DOI : 10.1186/s12859-016-1444-4.

Detailed record

Full text – View at publisher

Mechanism of Shiga Toxin Clustering on Membranes

W. Pezeshkian; H. Gao; S. Arumugam; U. Becken; P. Bassereau  et al.

ACS Nano. 2017. DOI : 10.1021/acsnano.6b05706.

Detailed record

View at publisher

Framework for efficient synthesis of spatially embedded morphologies

L. Vanherpe; L. Kanari; G. Atenekeng; J. Palacios; J. Shillcock

Physical Review E. 2016. DOI : 10.1103/PhysRevE.94.023315.

Detailed record

View at publisher

Membrane invagination induced by Shiga toxin B-subunit: from molecular structure to tube formation

W. Pezeshkian; A. G. Hansen; L. Johannes; H. Khandelia; J. C. Shillcock  et al.

Soft Matter. 2016. DOI : 10.1039/C6SM00464D.

Detailed record

Full text – View at publisher

Reconstructing the brain: from image stacks to neuron synthesis

J. C. Shillcock; M. Hawrylycz; S. Hill; H. Peng

Brain Informatics. 2016. DOI : 10.1007/s40708-016-0041-7.

Detailed record

Full text – View at publisher

In situ synthesis and simulation of polydisperse amphiphilic membranes

L. Vanherpe; L. Kanari; G. Atenekeng; J. Palacios; J. Shillcock

International Journal of Advances in Engineering Sciences and Applied Mathematics. 2015. DOI : 10.1007/s12572-015-0156-8.

Detailed record

View at publisher

The neocortical microcircuit collaboration portal: a resource for rat somatosensory cortex

S. Ramaswamy; J.-D. Courcol; M. Abdellah; S. R. Adaszewski; N. Antille  et al.

Frontiers In Neural Circuits. 2015. DOI : 10.3389/fncir.2015.00044.

Detailed record

Full text – View at publisher

Reconstruction and Simulation of Neocortical Microcircuitry

H. Markram; E. Muller; S. Ramaswamy; M. W. Reimann; M. Abdellah  et al.

Cell. 2015. DOI : 10.1016/j.cell.2015.09.029.

Detailed record

Full text – View at publisher

The effects of globotriaosylceramide tail saturation level on bilayer phases

W. Pezeshkian; V. V. Chaban; L. Johannes; J. Shillcock; J. H. Ipsena  et al.

Soft Matter. 2015. DOI : 10.1039/c4sm02456g.

Detailed record

View at publisher

Vesicles and Vesicle Fusion: Coarse-Grained Simulations

J. C. Shillcock

Biomolecular Simulations; Totowa, NJ: Humana Press, 2013. p. 659-697.

Detailed record

View at publisher

Spontaneous Vesicle Self-Assembly: A Mesoscopic View of Membrane Dynamics

J. C. Shillcock

Langmuir. 2012. DOI : 10.1021/la2033803.

Detailed record

View at publisher

Tension-induced fusion of bilayer membranes and vesicles

J. C. Shillcock; R. Lipowsky

Nature Materials. 2005. DOI : 10.1038/nmat1333.

Detailed record

View at publisher