Bruno Correia

Nationalité: Portuguese

EPFL STI IBI-STI LPDI
AAB 0 44 (Bâtiment AAB)
Station 19
1015 Lausanne

Office: AAB 0 44
EPFLSTIIBI-STILPDI

Site web: https://lpdi.epfl.ch

Formation

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2010 – 2010 Universidade Nova de Lisboa

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2004 – 2004 Universidade de Coimbra

Expériences professionnelles

Prix et distinctions

Fundação para a Ciência e Tecnologia

2006

European Research Council

2016

Radcliffe Institute - Harvard

2018

EPFL - SV

2019

2021

Publications représentatives

De novo protein design enables precise induction of functional antibodies in vivo

Sesterhenn F*, Yang C*, Cramer JT, Bonet J, Wen X, Abriata LA, Kucharska I, Chiang CI, Wang Y, Castoro G, Vollers SS, Galloux M, Dheilly E, Richard CA, Rosset S, Corthesy P, Georgeon S, Villard M, Richard CA, Descamps D, Delgado T, Oricchio E, Rameix-Welti MA, Mas V, Ervin S, Eleouet JF, Riffault S, Bates JT, Julien JP, Li Y, Jardetzky T, Krey T, Correia BE
Published in Science, 2020 in

Computational design of anti-CRISPR proteins with improved inhibition potency and expanded specificity

Mathony J*, Harteveld Z*, Schmelas C*, Belzen JU, Aschenbrenner S, Hoffmann MD, Stengl C, Scheck A, Rosset S, Grimm D, Eils R, Correia BE*, Niopek D*
Published in Nature Chemical Biology, 2020 in

Macromolecular modeling and design in Rosetta: recent methods and frameworks

Leman JK, Weitzner BD, Lewis SM, Adolf-Bryfogle J, Alam N, Alford RF, Aprahamian M, Baker D, Barlow KA, Barth P, Basanta B, Bender BJ, Blacklock K, Bonet J, Boyken SE, Bradley P, Bystroff C, Conway P, Cooper S, Correia BE, Coventry B, Das R, De Jong RM, DiMaio F, Dsilva L, Dunbrack R, Ford AS, Frenz B, Fu DY, Geniesse C, Goldschmidt L, Gowthaman R, Gray JJ, Gront D, Guffy S, Horowitz S, Huang PS, Huber T, Jacobs TM, Jeliazkov JR, Johnson DK, Kappel K, Karanicolas J, Khakzad H, Khar KR, Khare SD, Khatib F, Khramushin A, King IC, Kleffner R, Koepnick B, Kortemme T, Kuenze G, Kuhlman B, Kuroda D, Labonte JW, Lai JK, Lapidoth G, Leaver-Fay A, Lindert S, Linsky T, London N, Lubin JH, Lyskov S, Maguire J, Malmström L, Marcos E, Marcu O, Marze NA, Meiler J, Moretti R, Mulligan VK, Nerli S, Norn C, Ó'Conchúir S, Ollikainen N, Ovchinnikov S, Pacella MS, Pan X, Park H, Pavlovicz RE, Pethe M, Pierce BG, Pilla KB, Raveh B, Renfrew PD, Burman SSR, Rubenstein A, Sauer MF, Scheck A, Schief W, Schueler-Furman O, Sedan Y, Sevy AM, Sgourakis NG, Shi L, Siegel JB, Silva DA, Smith S, Song Y, Stein A, Szegedy M, Teets FD, Thyme SB, Wang RY, Watkins A, Zimmerman L, Bonneau R
Published in Nature Methods, 2020 in

Computationally designed STOP-CAR disrupted by small molecule confers on-command regulation of T-cell therapy

Giordano-Attianese G*, Gainza P*, Gray-Gaillard E*, Cribioli E, Shui S, Kim S, Kwak M, Vollers S, Osorio A, Reichenbach P, Bonet J, Oh B, Irving M*, Coukos G*, Correia BE*
Published in Nature Biotechnology, 2020 in

Deciphering interaction fingerprints from protein molecular surfaces using geometric deep learning

Gainza P, Sverrisson F, Monti F, Rodola E, Bronstein MM, Correia BE
Published in Nature Methods, 2020 in

rstoolbox - a Python library for large-scale analysis of computational protein design data and structural bioinformatics

Bonet J, Harteveld Z, Sesterhenn F, Scheck A, Correia BE
Published in BMC Bioinformatics, 2019 in

Boosting subdominant neutralizing antibody responses with a computationally designed epitope-focused immunogen

Sesterhenn F, Galloux M, Vollers S, Cspregi L, Yang C, Descamps D, Bonet J, Friedensohn S, Gainza P, Corthesy P, Chen M, Rosset S, Rameix-Welti MA, Elouet JF, Reddy ST, Graham B, Riffault S, Correia BE
Published in Plos Biology, 2019 in

Rosetta FunFolDes - a general framework for the computational design of functional proteins

Bonet J*, Wehrle S*, Schriever K*, Yang C*, Billet A, Sesterhenn F, Scheck A, Sverrisson F, Veselkova B, Vollers S, Lourman R, Villard M, Rosset S, Krey T, Correia BE
Published in Plos Computational Biology, 2018 in

Engineered anti-CRISPR proteins for optogenetic control of CRISPR/Cas9

Bubeck F, Hoffmann M, Harteveld Z, Aschenbrenner S, Bietz A, Waldhauer MC, Boerner K, Fakhiri J, Schmelas C, Dietz L, Grimm D, Correia BE, Eils R, Niopek D
Published in Nature Methods, 2018 in

Enseignement et PhD

Doctorant·es actuel·les

Shuhao Xiao, Irina Morozova, Yangyang Miao, Pengkang Guo, Mubarak Olanrewaju Idris, Adrian Wolfgang Dobbelstein, Julius Wenckstern, Flávia Mayumi Odahara de Abreu, Marin Paul Geoffroy Marie Ollagnon, Evgenia Elizarova, Christian Schellhaas, Tian Zhu, Ekaterina Pyatova, Lennart Nickel, Petra Elisabeth Marilena Balbi, Nicolas Manuel Goldbach, Maddalena Elia, Rebecca Manuela Neeser

A dirigé les thèses EPFL de

Fabian Sesterhenn, Che Yang, Andreas Scheck, Zander Harteveld, Sailan Shui, Sarah Wehrle, Alexandra Krina Van Hall-Beauvais, Anthony Marchand, Freyr Sverrisson, Karla Montserrat Castro Gilabert, Ahmed Sadek, Casper Goverde, Stephen Michael Buckley, Ilia Igashov, Arne Schneuing

A co-dirigé les thèses EPFL de

Mathieu Girardin, Lucia Bonati

Cours

Bio-organic chemistry

BIO-110

L'objectif du cours est de fournir une compréhension chimique et une intuition pour déchiffrer et prédire les processus chimiques dans les systèmes vivants.

Synthetic biology

BIOENG-320

Ce cours avancé de niveau Bachelor/Master couvrira les principes fondamentaux et les approches à l'interface de la biologie, la chimie, l'ingénierie et l'informatique pour la biologie synthétique. Ce cours requiert une pensée critique et analytique aux frontières de plusieurs disciplines.

Trends in chemical biology and drug discovery

BIOENG-510

Dans ce cours, nous aborderons les fondements scientifiques des approches de biologie chimique pour le développement de médicaments.