Christof Holliger
Professeur honoraire
christof.holliger@epfl.ch +41 21 693 47 24
Nationalité: Suisse
Date de naissance: 07.11.1959
Domaines de compétences
Bioremédiation
Traitement des eaux usées
Digestion anaérobie
Biogas et biofuel
Microbiologie environnementale
Ecologie microbiennes
Traitement des eaux usées
Digestion anaérobie
Biogas et biofuel
Microbiologie environnementale
Ecologie microbiennes
Biographie
Originaire dPublications
Publications Infoscience
Dernières publications
Multiple extracellular polymeric substance pathways transcribed by <i>Accumulibacter</i> and the flanking community during aerobic granule formation and after influent modification
APPLIED AND ENVIRONMENTAL MICROBIOLOGY. 2025. DOI : 10.1128/aem.01769-24.Modelling the metabolism of the polyphosphate-accumulating organism Candidatus Accumulibacter
Lausanne, EPFL, 2025. DOI : 10.5075/epfl-thesis-10853.MiDAS 5: Global diversity of bacteria and archaea in anaerobic digesters
Nature communications. 2024. DOI : 10.1038/s41467-024-49641-y.Microbial genome collection of aerobic granular sludge cultivated in sequencing batch reactors using different carbon source mixtures
Microbiology Resource Announcements. 2024. DOI : 10.1128/mra.00102-24.Conditional essentiality of the 11-subunit complex I-like enzyme in strict anaerobes: the case of Desulfitobacterium hafniense strain DCB-2
Frontiers in Microbiology. 2024. DOI : 10.3389/fmicb.2024.1388961.Retrofitting conventional activated sludge WWTPs with hydrocyclones to extend their lifetime by densifying sludge
2023Proteome adaptations of the organohalide-respiring Desulfitobacterium hafniense strain DCB-2 to various energy metabolisms
Frontiers In Microbiology. 2023. DOI : 10.3389/fmicb.2023.1058127.Environment rather than breed or body site shapes the skin bacterial community of healthy sheep as revealed by metabarcoding
Veterinary Dermatology. 2023. DOI : 10.1111/vde.13223.Structure of a membrane-bound menaquinol:organohalide oxidoreductase
Nature Communications. 2023. DOI : 10.1038/s41467-023-42927-7.Functional and structural characterization of polyphosphate-accumulating organisms in aerobic granular biofilms
Lausanne, EPFL, 2023. DOI : 10.5075/epfl-thesis-10927.Evaluation of chemically-enhanced microsieving as primary treatment of municipal wastewater
2022Assessing the value of kinetic results from biochemical methane potential tests: Reproducibility from a large inter-laboratory study
Cleaner Chemical Engineering. 2022. DOI : 10.1016/j.clce.2022.100065.Characterization of the membrane protein complexes responsible for reductive dehalogenation
2022. p. 38 - 38. DOI : 10.1016/j.bbabio.2022.148711.It takes two times two to tango - cryoEM structure resolution of the membrane-bound tetrachloroethene reductive dehalogenase complex
2022. p. 33 - 34. DOI : 10.1016/j.bbabio.2022.148699.Disentangle genus microdiversity within a complex microbial community by using a multi-distance long-read binning method: example of Candidatus Accumulibacter
Environmental Microbiology. 2022. DOI : 10.1111/1462-2920.15947.Stoichiometry of the Gene Products From the Tetrachloroethene Reductive Dehalogenase Operon pceABCT
Frontiers In Microbiology. 2022. DOI : 10.3389/fmicb.2022.838026.Characterization of the electron-accepting part of the organohalide respiration chain of Dehalobacter and Desulfitobacterium
Lausanne, EPFL, 2022. DOI : 10.5075/epfl-thesis-9359.Complex I-like enzymes in organohalide-respiring bacteria
DehaloCon III 3rd International Conference on Anaerobic Biological Dehalogenation, online, September 27-30, 2021.Absolute quantification of pceABCT gene products and characterization of the membrane protein complex responsible for the reduction of tetrachloroethene in Dehalobacter restrictus
DehaloCon III 3rd International Conference on Anaerobic Biological Dehalogenation, online, September 27-30, 2021.Conditional essentiality of a complex I-like enzyme in strict anaerobes: the case of Desulfitobacterium
Perspectives in Bioenergetics, online, September 8-10, 2021.Organohalide respiration: breakthrough towards the elucidation of the electron-accepting moiety of the respiratory chain
Annual Congress of the Swiss Society of Microbiology (SSM 2021), online, September 2-3, 2021.Polyhydroxyalkanoate (PHA) production on fermented wastewater sludge: comparison of reactor mode and mechanistic definition of storage responses
2021Plastic is fantastic: polyhydroxyalkanoate production on fermented wastewater sludge
2021Organohalide respiration in Firmicutes: energy metabolism and transcription regulation
Lausanne, EPFL, 2021. DOI : 10.5075/epfl-thesis-8451.Towards a standardization of biomethane potential tests: a commentary
Water Science And Technology. 2021. DOI : 10.2166/wst.2020.569.Multistability and Reversibility of Aerobic Granular Sludge Microbial Communities Upon Changes From Simple to Complex Synthetic Wastewater and Back
Frontiers In Microbiology. 2020. DOI : 10.3389/fmicb.2020.574361.Improving Inter-Laboratory Reproducibility in Measurement of Biochemical Methane Potential (BMP)
Water. 2020. DOI : 10.3390/w12061752.Power and Limitations of Biochemical Methane Potential (BMP) Tests
Frontiers In Energy Research. 2020. DOI : 10.3389/fenrg.2020.00063.Hybrid Transcriptional Regulators for the Screening of Target DNA Motifs in Organohalide-Respiring Bacteria
Frontiers In Microbiology. 2020. DOI : 10.3389/fmicb.2020.00310.Impact of iron- and/or sulfate-reduction on a cis-1,2-dichloroethene and vinyl chloride respiring bacterial consortium: experiments and model-based interpretation
Environmental Science-Processes & Impacts. 2020. DOI : 10.1039/c9em00544g.Chlorinated ethene plume evolution after source thermal remediation: Determination of degradation rates and mechanisms
Journal Of Contaminant Hydrology. 2019. DOI : 10.1016/j.jconhyd.2019.103551.Une approche intégrée pour évaluer et surveiller la déchloration réductive d'éthènes chlorés dans des aquifères contaminés – Evaluation de la traitabilité et surveillance d'un site
Quatrièmes Rencontres nationales de la Recherche sur les sites et sols pollués, Le Beffroi de Montrouge, Portes de Paris, France, November 26-27, 2019.Optimisation d’un traitement par microtamis et valorisation des boues primaires de STEP
2019Wastewater and green waste biorefinery Degradation of simple sugars using mixed cultures of purple non-sulfur bacteria: an insight into microbial interactions
2019Quantifying bacterial structure of aerobic granular sludge using image analysis
2019Involvement of respiratory complex I in organohalide respiration?
Annual Meeting of the Swiss Society of Microbiology 2019 (Zurich), Zurich, Switzerland, 3-4 September, 2019.ORGANOHALIDE RESPIRATION: STUDY OF THE MEMBRANE PROTEIN COMPLEX RESPONSIBLE FOR THE REDUCTION OF HALOGENATED COMPOUNDS
Annual Meeting of the Swiss Society of Microbiology 2019 (Zurich), Zurich, Switzerland, 3-4 September, 2019.A modeling approach integrating microbial activity, mass transfer, and geochemical processes to interpret biological assays: An example for PCE degradation in a multi-phase batch setup
Water Research. 2019. DOI : 10.1016/j.watres.2019.05.087.Organic substrate diffusibility governs microbial community composition, nutrient removal performance and kinetics of granulation of aerobic granular sludge
Water Research X. 2019. DOI : 10.1016/j.wroa.2019.100033.Explore RdhK based regulatory network of organohalide respiration using a hybrid proteins strategy
Bacterial Electron Transfer and their Regulation Meeting, Saint-Tropez, France, 11 to 14 March 2018.ANAEROBIC BIODEGRADATION OF ORGANOHALIDE POLLUTANTS: A CRUCIAL STEP TOWARDS THE ELUCIDATION OF PROTEINS INVOLVED
SME 2019, Lausanne, Switzerland, 31-1-19 to 01-02-19.RDHK Family, Regulators dedicated to Organohalide Respiration - Sequence Diversity and Functional Prediction
Swiss Microbial Ecology Meeting - SME 2019, Lausanne, Switzerland, 30 Jan to 1 Feb 2019.Anaerobic Biodegradation of organohalide pollutants: a crucial step towards the elucidation of proteins involved
Swiss Microbial Ecology Meeting 2019 (Lausanne), Lausanne, Switzerland, January 30-February 2, 2019.RDHK Family, Regulators dedicated to Organohalide Respiration - Sequence Diversity and Functional Prediction
Swiss Microbial Ecology Meeting 2019 (Lausanne), Lausanne, Switzerland, January 30-February 2, 2019.Influence of Wastewater Composition on the Microbial Communities of Aerobic Granular sludge
Swiss Microbial Ecology Meeting 2019 (Lausanne), Lausanne, Switzerland, January 30-February 2, 2019.Imaging the aerobic granular sludge microbial community using light-sheet fluorescence micros
Swiss Microbial Ecology Meeting 2019 (Lausanne), Lausanne, Switzerland, January 30-February 2, 2019.The effect of different organic substrates on the microbial communities of aerobic granular wastewater treatment sludge
Lausanne, EPFL, 2019. DOI : 10.5075/epfl-thesis-9678.Identifying the role of complex I in organohalide respiration of Firmicutes
EMBO Practical course: Targeted Proteomics, Experimental design and data analysis, Barcelona, Spain, 11-16 November.Strain-level diversity drives alternative community types in millimetre-scale granular biofilms
Nature Microbiology. 2018. DOI : 10.1038/s41564-018-0242-3.Evolution of microbial communities in aerobic granular sludge during changes in wastewater composition
Annual Congress of the Swiss Society for Microbiology, Lausanne, Switzerland, 28-30 August 2018.Development of new strategies to produce and characterize PceC, a membrane-bound flavoprotein involved in organohalide respiration
Annual Swiss Society for Microbiology Meeting, Lausanne, Lausanne, Switzerland, 28-30 August 2018.Explore RdhK based regulatory network of organohalide respiration using a hybrid proteins strategy
Annual Congress of the Swiss Society for Microbiology, Lausanne, Switzerland, 28-30 August 2018.Evolution of microbial communities in aerobic granular sludge during changes in wastewater composition
ISME 2018, Leipzig, Germany, 12-17 August 2018.Coexistence of two distinct Sulfurospirillum populations respiring tetrachloroethene—genomic and kinetic considerations
2018Coexistence of two distinct Sulfurospirillum populations respiring tetrachloroethene-genomic and kinetic considerations
FEMS Microbiology Ecology. 2018. DOI : 10.1093/femsec/fiy018.Evolution of Microbial Communities and Nutrient Removal Performances of Aerobic Granular Sludge during Change of Substrates
IWA Biofilms : Granular Sludge Conference, Delft, Netherlands, March 18-21, 2018.RdhC, a family of membrane-bound flavoproteins involved in electron transfer in organohalide respiration ?
Bacterial Electron Transfer and their Regulation Meeting, Saint-Tropez, France, March 11-14, 2018.Adsorptive Removal of Pb(II) and As(V) from Aqueous Solution by PVDF/HMO Ultrafiltration Mixed Matrix Membrane
2018Editorial: Special issue on anaerobic biological dehalogenation
FEMS Microbiology Ecology. 2018. DOI : 10.1093/femsec/fiy054.Properties of Enzymes Involved in Tetrachloroethene Respiration : From Physiology to Protein Function
Lausanne, EPFL, 2017. DOI : 10.5075/epfl-thesis-7762.La STEP d'Aïre: nouveau lieu de création et de diffusion artistique à Genève
2017Methane Production of Full-Scale Anaerobic Digestion Plants Calculated from Substrate's Biomethane Potentials Compares Well with the One Measured On-Site
Frontiers in Energy Research. 2017. DOI : 10.3389/fenrg.2017.00012.Kinetic considerations of two Sulfurospirillum spp. competing for tetrachloroethene
DehaloCon II - A Conference on Anaerobic Biological Dehalogenation, Leipzig, Germany, March 26-29, 2017.Effect of Different Influent Compositions on Microbial Communities, Physical Characteristics and Nutrient Removal Performances of Aerobic Granular Sludge
2017Hybrid proteins for the screening of transcription regulators of reductive dehalogenase gene clusters
DehaloCon II - A Conference on Anaerobic Biological Dehalogenation, Leipzig, Germany, March 26-29, 2017.Influence of Wastewater Composition on Microbial Communities of Aerobic Granules and their Nutrient Removal Performances
BIOFILM 2017 Conference Office, Dublin, Ireland, May 9-12, 2017.Effect of in influent composition on the microbial communities and granulation process in aerobic granular sludge systems
2017Modeling Hydraulic Transport and Anaerobic Uptake by PAOs and GAOs During Wastewater Feeding in EBPR Granular Sludge Reactors
Biotechnology and Bioengineering. 2017. DOI : 10.1002/bit.26295.Extraction of carotenoids from Chlorella vulgaris using green solvents and syngas production from residual biomass
Algal Research. 2017. DOI : 10.1016/j.algal.2017.05.003.The Genus Dehalobacter
Organohalide-Respiring Bacteria; Berlin Heidelberg: Springer-Verlag, 2016. p. 153 - 171.Identification of microorganisms in Aerobic Granular Sludgeactively involved in biological phosphorus removal
IWA Specialist Conference Microbial Ecology and Water Engineering, Copenhague, Denmark, September 4-7, 2016.Identification of microorganisms in Aerobic Granular Sludgeactively involved in biological phosphorus removal
Swiss Society for Microbiology, Bern, Switzerland, June 13-15, 2016.Validation of an integrative methodology to assess and monitor reductive dechlorination of chlorinated ethenes in contaminated aquifers
Frontiers in Environmental Science. 2016. DOI : 10.3389/fenvs.2016.00007.Laboratory and field scale bioremediation of hexachlorocyclohexane (HCH) contaminated soils by means of bioaugmentation and biostimulation
BIODEGRADATION. 2016. DOI : 10.1007/s10532-016-9765-6.Competition of two Sulfurospirillum populations for tetrachloroethene
Swiss Society of Microbiology, Bern, Switzerland, June 13-15, 2016.Optimizing the extraction of extracellular DNA of aerobic granular biofilms
Swiss Society for Microbiology, Bern, Switzerland, June 13-15, 2016.Optimisation du système d’assainissement des eaux urbaines Réseau-STEP-Milieu récepteur par une approche de gestion intégrée
2016Towards a standardization of biomethane potential tests
Water Science and Technology. 2016. DOI : 10.2166/wst.2016.336.Evolution of microbial communities and nutrient removal performances in aerobic granular sludge sequencing batch reactor during change of substrate
Swiss Society of Microbiology meeting, Bern, Switzerland, June 13-15, 2016.Polyphosphate - a key biopolymer in aerobic granular sludge technology
Annual Conference 2016 of the Association for General and Applied Microbiology (VAAM2016), Jena, Germany, 13-16 March 2016.Indirect evidences for PCB congener degradation by Geobacteraceae in anaerobic sediment-free microcosms
ISME16, Montréal, Canada, August 21-26, 2016.Evolution of microbial communities and nutrient removal performances in aerobic granular sludge sequencing batch reactor during change of substrate
2016. Microbial Ecology and Water Engineering & Biofilms Specialist Groups, Copenhagen, Denmark, September 4-9, 2016.Role of ammonia-oxidizing bacteria in micropollutant removal from wastewater with aerobic granular sludge
Water Science and Technology. 2016. DOI : 10.2166/wst.2015.514.Indirect Evidence Link PCB Dehalogenation with Geobacteraceae in Anaerobic Sediment-Free Microcosms
Frontiers in Microbiology. 2016. DOI : 10.3389/fmicb.2016.00933.Détermination de la production de méthane d’installations de digestion industrielles à partir de tests BMP en laboratoire
2015Screening of the bacterial reductive dechlorination potential of chlorinated ethenes in contaminatedaquifers - A technical assistance manual for assessment of natural attenuation of chloroethenes-contaminated sites
2015Functional genomics of corrinoid starvation in the organohalide-respiring bacterium Dehalobacter restrictus strain PER-K23
Frontiers In Microbiology. 2015. DOI : 10.3389/fmicb.2014.00761.Sulfamethoxazole and isoproturon degradation and detoxification by a laccase-mediator system: Influence of treatment conditions and mechanistic aspects
Biochemical Engineering Journal. 2015. DOI : 10.1016/j.bej.2015.06.008.Harvesting of Chlorella sorokiniana by co-culture with the filamentous fungus Isaria fumosorosea: A potential sustainable feedstock for hydrothermal gasification
Bioresource Technology. 2015. DOI : 10.1016/j.biortech.2015.03.026.Etude de la sensibilité d'algues unicellulaires au cuivre: le rôle de l'interaction des espèces et de la lumière
2015Methane oxidation pathways in Lake La Cruz
2015Phage-dependent variability of Candidatus "Accumulibacter phosphatis" populations in aerobic granular sludge
6th Swiss Microbial Ecology Meeting, Locarno, Switzerland, September 10-12, 2015.Faecal sludge treatment: Optimization of Ascaris eggs enumeration and inactivation, and start-up of an anaerobic thermophilic acid-phase digester
2015Towards Solar Decathlon: Concepts for a Sustainable Urban Water Management in a new eco-district
2015Phage-dependent variability of Candidatus ‘Accumulibacter phosphatis’ populations in aerobic granular sludge
2015. 6th Symposium Swiss Microbial Ecology Meeting, Ascona, Switzerland, September 10-12, 2015.Divergent PCB organohalide-respiring consortia enriched from the efflux channel of a former Delor manufacturer in Eastern Europe
Ecotoxicology and Environmental Safety. 2015. DOI : 10.1016/j.ecoenv.2015.05.038.Desulfitobacterium hafniense TCE1 membrane proteomics
Annual Meeting and Assembly of the Swiss Society of Microbiology, Lugano, Switzerland, May 28-29, 2015.Influence of Temperature, VFA and pH on the inactivation of pathogens in anaerobic digestion of faecel sludge
2015A review of the fate of micropollutants in wastewater treatment plants
WIREs Water. 2015. DOI : 10.1002/wat2.1090.Temporal evolution of bacterial communities associated with the in situ wetland-based remediation of a marine shore porphyry copper tailings deposit
Science of the Total Environment. 2015. DOI : 10.1016/j.scitotenv.2015.06.076.Success and failure assessment methodology for wastewater and faecal sludge treatment projects in low-income countries
Journal Of Environmental Planning And Management. 2015. DOI : 10.1080/09640568.2014.943343.Micropollutant removal from municipal wastewater : from conventional treatments to advanced biological processes
Lausanne, EPFL, 2015. DOI : 10.5075/epfl-thesis-6505.Desulfitobacterium hafniense TCE1 membrane proteomics
Bacterial Electron Transfer Processes and their Regulation, Vimeiro, Portugal, March 15-18, 2015.Understanding the metabolism of tetrachloroethene-respiring Dehalobacter restrictus : from genome analysis, corrinoid cofactor biosynthesis to regulation of reductive dehalogenases
Lausanne, EPFL, 2015. DOI : 10.5075/epfl-thesis-6709.An ecological approach for understanding the reductive dechlorination process of chlorinated ethenes in contaminated aquifers
6th Swiss Microbial Ecology Meeting, Locarno, Switzerland, September 10-12, 2015.Modelling bacterial selection during the plug-flow feeding phase of aerobic granular sludge biofilm reactors
2014. Poster : IWA/WEF Wastewater Treatment Modelling Seminar, Spa, Belgium, March 30 - April 2, 2014. p. 322 - 325.Functional characterization of a new tetrachloroethene reductive dehalogenase of Sulfurospirillum spp. identified in mixed cultures
DehaloCon - A Conference on Anaerobic Biological Dehalogenation, Jena, Germany, March 23-26, 2014.Assessment of the impacts of local conditions and sampling methods on the characteristics of faecal sludge
2014Multiple Dual C–Cl Isotope Patterns Associated with Reductive Dechlorination of Tetrachloroethene
Environmental Science & Technology. 2014. DOI : 10.1021/es500822d.The knowns and unknowns of the physiology and biochemistry of organohalide respiration
Keynote lecture at DehaloCon - A Conference on Anaerobic Biological Dehalogenation, Jena, Germany, March 23-26, 2014.Corrinoid Auxotrophy in the Obligate Organohalide-Respiring Dehalobacter restrictus strain PER-K23
ASM2014, 114th General Meeting, Boston, Massachusetts, USA, May 17-20, 2014.Microalgae for wastewater treatment, CO2 mitigation and biofuels : dream or sustainable maid for all work?
11th International Phytotechnology Conference, Heraklion, Crete, Greece, September 30 - October 3, 2014.Wastewater treatment processes modelling for anaerobic digestion effluents
2014The biofilm granulation mechanisms depend on the predominant bacterial populations involved
2014. Poster : Biofilm 6 International Conference, Vienna, Austria, May, 11-13, 2014. p. 90 - 91.Assessment of organic waste availability and suitability for the co-digestion of faecal sludge in Vietnam
2014Use of silicate minerals for long-term pH control during reductive dechlorination of high tetrachloroethene concentrations in continuous flow-through columns
Science of the Total Environment. 2014. DOI : 10.1016/j.scitotenv.2014.02.099.Nitrogen Removal over Nitrite by Aeration Control in Aerobic Granular Sludge Sequencing Batch Reactors
International Journal of Environmental Research and Public Health. 2014. DOI : 10.3390/ijerph110706955.Salvage of the essential corrinoid cofactor in Dehalobacter restrictus
SSM - 72nd Annual Assembly, Fribourg, Switzerland, June 19-20, 2014.Understanding what limits biological phosphorus removal at Uster’s wastewater treatment plant
2014Linking microbial population dynamics and nutrient removal during wastewater treatment by aerobic granular sludge
15th International Symposium on Microbial Ecology, Seoul, South Korea, 24-29 August 2014.Control of groundwater pH during bioremediation: Improvement and validation of a geochemical model to assess the buffering potential of ground silicate minerals
Journal of Contaminant Hydrology. 2014. DOI : 10.1016/j.jconhyd.2014.01.006.Evaluation of pathogens inactivation during thermophilic anaerobic digestion of faecal sludge
2014Proteome analysis of the response of Dehalobacter restrictus to cobalamin starvation
15th International Symposium on Microbial Ecology, Seoul, South Korea, 24-29 August 2014.Multilevel Correlations in the Biological Phosphorus Removal Process: from Bacterial Enrichment to Conductivity-Based Metabolic Batch Tests and Polyphosphatase Assays
Biotechnology and Bioengineering. 2014. DOI : 10.1002/bit.25320.Use of silicate minerals for pH control during reductive dechlorination of chloroethenes in batch cultures of different microbial consortia
Applied and Environmental Microbiology. 2014. DOI : 10.1128/AEM.00493-14.Regulation of the Corrinoid Metabolism in Desulfitobacteria
DehaloCon - A Conference on Anaerobic Biological Dehalogenation, Jena, Germany, June 23 - 26, 2014.Corrinoid auxotrophy in the obligate organohalide-respiring Dehalobacter restrictus strain PER-K23
DehaloCon - A Conference on Anaerobic Biological Dehalogenation, Jena, Germany, March 23-26, 2014.Linking bacterial population dynamics and nutrient removal in the granular sludge biofilm ecosystem engineered for wastewater treatment
FEMS Microbiology Ecology. 2014. DOI : 10.1111/1574-6941.12326.On-site biostimulation evaluation of a remediated perchloroethene-contaminated acquifer located in Jablunkov, Czech Republic
2014Optimization of operation conditions for the startup of aerobic granular sludge reactors biologically removing carbon, nitrogen, and phosphorous
Water Research. 2014. DOI : 10.1016/j.watres.2014.04.011.Assessment of bioremediation potential and monitoring of biological reductive dechlorination in sites contaminated with chlorinated ethenes
SSM - 72nd Annual Assembly, Fribourg, Switzerland, June 19-20, 2014.Functional diversity of reductive dehalogenases in a bacterial consortium degrading chloroethenes
SSM - 72nd Annual Assembly, Fribourg, Switzerland, June 19-20, 2014.Selecting appropriate treatment technologies for faecal sludge (FS) from onsite sanitation systems
2014 Tech4Dev International Conference, EPFL Lausanne, Switzerland, June 4-6, 2014.Aerobic Granules: Microbial Landscape and Architecture, Stages, and Practical Implications
Applied And Environmental Microbiology. 2014. DOI : 10.1128/Aem.00250-14.Assessment of bioremediation potential and monitoring of biological reductive dechlorination in sites contaminated with chlorinated ethenes
Biotech 2014 and 6th Czech-Swiss Symposium with Exhibition, Prague, Czech Republic, June 11-14. 2014.Treatment of micropollutants in municipal wastewater using white-rot fungi
SETAC Europe 24th annual meeting (Society of Environmental Toxicology And Chemistry), Basel, May 11-15, 2014.Towards Management of the Bacterial Resource for Nutrient Removal in Granular Sludge Biofilm Systems
2014. Keynote presentation : 2nd IWA Specialist Conference on Eco Technologies for Sewage Treatment Plants "Eco STP 2014", Verona, Italy, June 23-25, 2014. p. 491 - 492.Bacterial Resource Management for Nutrient Removal in Aerobic Granular Sludge Wastewater Treatment Systems
Lausanne, EPFL, 2013. DOI : 10.5075/epfl-thesis-5641.Complete genome sequence of Dehalobacter restrictus PER-K23T
Standards in Genomic Sciences. 2013. DOI : 10.4056/sigs.3787426.Influence of treatment conditions on the oxidation of micropollutants by Trametes versicolor laccase
New Biotechnology. 2013. DOI : 10.1016/j.nbt.2013.06.004.Changes in the Bacterial Community and lin Genes Diversity during Biostimulation of Indigenous Bacterial Community of Hexachlorocyclohexane (HCH) Dumpsite Soil
Microbiology. 2013. DOI : 10.1134/S0026261713020185.Metabolomics of hexachlorocyclohexane (HCH) transformation: ratio of LinA to LinB determines metabolic fate of HCH isomers
Environmental Microbiology. 2013. DOI : 10.1111/1462-2920.12009.Corrinoid auxotrophy in the obligate organohalide-respiring Dehalobacter restrictus
71st Annual Assembly of the SSM, Interlaken, Switzerland, June 26-27, 2013.Optimized aeration strategies for nitrogen and phosphorus removal with aerobic granular sludge
Water Research. 2013. DOI : 10.1016/j.watres.2013.07.030.Functional genotyping of Sulfurospirillum spp. in mixed cultures allowed the identification of a new tetrachloroethene reductive dehalogenase
SME 2013 : 5th Swiss Microbial Ecology Meeting, Murten, Switzerland, February 4-6, 2013.Corrinoid auxotrophy in the obligate organohalide respiring Dehalobacter restrictus
SME 2013 : 5th Swiss Microbial Ecology Meeting, Murten, Switzerland, February 4-6, 2013.Functional Genotyping of Sulfurospirillum spp. in Mixed Cultures Allowed the Identification of a New Tetrachloroethene Reductive Dehalogenase
Applied And Environmental Microbiology. 2013. DOI : 10.1128/Aem.02312-13.Bacterial selection for nutrient removal in aerobic granular sludge wastewater treatment systems
2nd Water Research Conference 2013, Singapore, January 20-23, 2013.Optimization of Reactor Startup and Nitrogen Removal of Aerobic Granular Sludge Systems
Lausanne, EPFL, 2013. DOI : 10.5075/epfl-thesis-5879.The restricted metabolism of the obligate organohalide respiring bacterium Dehalobacter restrictus: lessons from tiered functional genomics
Philosophical Transactions of the Royal Society B: Biological Sciences. 2013. DOI : 10.1098/rstb.2012.0325.Linking microbial population dynamics and nutrient removal during wastewater treatment
5th International Conference Microbial Ecology and Water Engineering 2013, Ann Arbor, Michigan, USA, July 7-10, 2013.Assessment of bioremediation potential and monitoring of biological reductive dechlorination in sites contaminated with chlorinated ethenes
Biotech 2014 and Czech-Swiss Symposium, Prague, Czech Republic, June 11-14.Bacterial resource management for nutrient removal in aerobic granular sludge
5th International Conference Microbial Ecology Water Engineering, Ann Arbor, Michigan, USA, July 4-7, 2013.Correlations between environmental variables and bacterial community structures suggest Fe(III) and vinyl chloride reduction as antagonistic terminal electron-accepting processes
Environmental Science & Technology. 2013. DOI : 10.1021/es304017s.Identification of trigger factors selecting for polyphosphate- and glycogen-accumulating organisms in aerobic granular sludge sequencing batch reactors
Water Research. 2013. DOI : 10.1016/j.watres.2013.08.043.PyroTRF-ID: a novel bioinformatics methodology for the affiliation of terminal-restriction fragments using 16S rRNA gene pyrosequencing data
SME 2013 : 5th Swiss Microbial Ecology Meeting, Murten, Switzerland, February 4-6, 2013.Respiring chlorinated solvents helps protecting our drinking water resources
Symposium zu Ehren von Professor Emeritus Thomas Egli, Dübendorf, Switzerland, July 4, 2013.Corrinoid auxotrophy in the obligate organohalide respiring Dehalobacter restrictus
FEMS 2013, Leipzig, Germany, July 21-25, 2013.Bio-flocculation of the Microalgae Chlorella sorokiniana with the Filamentous Fungi Isaria fumoroseus through the Formation of Lichen Pellets
UBIOCHEM IV, 4th International Workshop of COST Action CM0903, Valencia, Spain, October 14-16, 2013.Etude microbiologique du potentiel de bioremédiation de sites contaminés par des hydrocarbures chlorés
6ème journée technique ChloroNet 2013, Soleur, Switzerland, November 28, 2013.Impact Assessment of Pumping Parameters on Groundwater Bacterial Communities
Ground Water Monitoring & Remediation. 2013. DOI : 10.1111/j.1745-6592.2012.01420.x.Functional genotyping of Sulfurospirillum spp. in mixed cultures allowed the identification of a new tetrachloroethene reductive dehalogenase
71st Annual Assembly of the SSM, Interlaken, Switzerland, June 26-27, 2013.Pelletization of micro-algae by induced lichen formation through co-culture with filamentous fungi
SME 2013 : 5th Swiss Microbial Ecology Meeting, Murten, Switzerland, February 4-6, 2013.Using Silicate Mineral Particles for pH Control during in situ Bioremediation of Chlorinated Ethene Source Zones
Lausanne, EPFL, 2013. DOI : 10.5075/epfl-thesis-5854.Functional genotyping of Sulfurospirillum spp. in mixed cultures allowed the identification of a new tetrachloroethene reductive dehalogenase
FEMS 2013, Leipzig, Germany, July 21-25, 2013.Bacterial versus fungal laccase: potential for micropollutant degradation
AMB Express. 2013. DOI : 10.1186/2191-0855-3-63.Conception of a biological activated carbon filter for micropollutants removal in wastewater
2013Laccases: Potential treatment for removal of micropollutants in municipal wastewater?
14th EuCheMS International Conference on Chemistry and the Environment (ICCE 2013), Barcelona, Spain, June 25-28, 2013.Diversity of cobalamin riboswitches in the corrinoid-producing organohalide respirer Desulfitobacterium hafniense
Journal of Bacteriology. 2013. DOI : 10.1128/JB.00730-13.The biofilm granulation mechanisms depend on the predominant populations involved
71st Annual Assembly of the SSM, Interlaken, Switzerland, June 26-27, 2013.Enantioselective Dehydrochlorination of delta-Hexachlorocyclohexane and delta-Pentachlorocyclohexene by LinA1 and LinA2 from Sphingobium indicum B90A
Applied And Environmental Microbiology. 2013. DOI : 10.1128/Aem.01770-13.Assessment of bacterial and structural dynamics in aerobic granular sludge biofilms
Frontiers in Microbiology. 2013. DOI : 10.3389/fmicb.2013.00175.Multidisciplinary approach for evaluation of the complete removal of chloroethenes in contaminated aquifer
BioMicroWorld 2013, Madrid, Spain, October 2-4, 2013.Inoculum origin and adaptation had no influence on biomethane potential results with different substrates
2012. Oral presentation at the IV International Symposium on Energy from Biomass and Waste, San Servolo, Venice, Italy, November 12-15, 2012.Intensity of Light Incident and Photoperiod of LED illumination based system on Scenedesmus vacuolatus growth
9th European Workshop on Biotechnology of Microalgae, Nuthetal, Germany, June 2-3, 2012.Identification of parameters affecting the outcome of biochemical methane potential (BMP) tests
2012Utilization of Silicate Minerals for pH Control during In Situ Bioremediation of Chlorinated Solvents
The Eighth International Conference on Remediation of Chlorinated and Recalcitrant Compounds, Monterey, California, USA, May 21- 24,2012.Functional diversity of reductive dehalogenases in a bacterial consortium degrading chloroethenes
SSM, Joint Annual Meeting 2012, St.Gallen, Switzerland, June 21-22, 2012.Towards the sustainable cultivation of microalgae for the production of biofuels and added-value chemicals
Keynote lecture at the 27th Congress of the Phycological Society of Southern Africa, Qolora, South Africa, June 17-22, 2012.Assessing the Bacterial Ecology of Organohalide Respiration for the Design of Bioremediation Strategies
Lausanne, EPFL, 2012. DOI : 10.5075/epfl-thesis-5379.Functional diversity of reductive dehalogenases in a bacterial consortium degrading chloroethenes
The 6th Swiss Molecular Microbiology Meeting (SWIMM 2012), Villars-sur-Ollon, September 6th - 7th.Microalgal carotenoid recovery in a biorefinery approach
2012. 3rd workshop COST Action CM0903 “Utilisation of biomass for fuel and Chemicals (UBIOCHEM)”, Thessaloniki, Greece.Development of a microalgal process for bioenergy production, CO2 mitigation and wastewater treatment
Keynote lecture at the 5th International Symposium on Biosorption and Bioremediation, Prague, Czech Republic, June 24-28, 2012.Determination of optimal conditions for the degradation of micropollutants by laccase from Trametes versicolor
Environmental Microbiology and Biotechnology (EMB), Bologna, Italy, April 10-12, 2012.The corrinoid metabolism in desulfitobacterium hafniense - genetic and regulatory aspects
The 6th Swiss Molecular Microbiology Meeting (SWIMM 2012), Villars-sur-Ollon, September 6th - 7th.Bacterial Selection during the Formation of Early-Stage Aerobic Granules in Wastewater Treatment Systems Operated Under Wash-Out Dynamics
Frontiers in Microbiology. 2012. DOI : 10.3389/fmicb.2012.00332.The genome of Dehalobacter restrictus - high gene redundancy for a restricted metabolism
SSM, Joint Annual Meeting 2012, St.Gallen, Switzerland, June 21 - 22, 2012.Ecology and Biogeography of Bacterial Communities Associated with Chloroethene-Contaminated Aquifers
Frontiers in Microbiology. 2012. DOI : 10.3389/fmicb.2012.00260.Numerical modeling of field scale application of ground silicate minerals for groundwater pH buffering
AGU Fall meeting, San Francisco, California, USA, December 3-7, 2012.Evaluation of silicate minerals for pH control during bioremediation: Application to chlorinated solvents
Water, Air, and Soil Pollution. 2012. DOI : 10.1007/s11270-011-1058-4.Intensity of Light Incident and Photoperiod of LED illumination based system on Scenedesmus vacuolatus growth
2012. 9th European Workshop on Biotechnology of Microalgae, Nuthetal, Germany, June 4-5.PyroTRF-ID: a novel bioinformatics approach for the identification of terminal-restriction fragments using microbiome pyrosequencing data
SSM, Joint Annual Meeting 2012, St.Gallen, Switzerland, June 21-22, 2012.Microalgal carotenoid recovery in a biorefinery approach
3rd Workshop COST Action CM0903 "Utilization of biomass for fuel and chemicals (UBIOCHEM)", Thessaloniki, Greece, November 1-3.Modelling migration and dissolution of mineral particles in saturated porous media
EGU General Assembly 2012, Vienna, April 22-27, 2012.PyroTRF-ID: a novel bioinformatics methodology for the affiliation of terminal-restriction fragments using 16S rRNA gene pyrosequencing data
BMC Microbiology. 2012. DOI : 10.1186/1471-2180-12-306.Towards the sustainable cultivation of microalgae to produce renewable biofuels and added-value chemicals
9th International Conference on Phytotechnologies, Hasselt, Belgium, September 11-14, 2012.Enzymatic Conversion of epsilon-Hexachlorocyclohexane and a Heptachlorocyclohexane Isomer, Two Neglected Components of Technical Hexachlorocyclohexane
Environmental Science & Technology. 2012. DOI : 10.1021/es204143x.The Physiological Opportunism of Desulfitobacterium hafniense Strain TCE1 towards Organohalide Respiration with Tetrachloroethene
Applied and Environmental Microbiology. 2012. DOI : 10.1128/AEM.01221-12.An unusual tandem-domain rhodanese harbouring two active sites identified in Desulfitobacterium hafniense
Febs Journal. 2012. DOI : 10.1111/j.1742-4658.2012.08660.x.Anaerobic degradation of vinyl chloride in aquifer microcosms
Journal of Environmental Quality. 2011. DOI : 10.2134/jeq2010.0403.Frequent concomitant presence of Desulfitobacterium spp. and “Dehalococcoides” spp. in chloroethene-dechlorinating microbial communities
Applied Microbiology and Biotechnology. 2011. DOI : 10.1007/s00253-010-3042-0.Dynamics of Microbial Community Structure of and Enhanced Biological Phosphorus Removal by Aerobic Granules Cultivated on Propionate or Acetate
Applied and Environmental Microbiology. 2011. DOI : 10.1128/AEM.05738-11.Redundancy and specificity of multiple Trigger Factor chaperones in Desulfitobacteria
Microbiology. 2011. DOI : 10.1099/mic.0.050880-0.Significance of Rhodocyclaceae for the formation of aerobic granular sludge biofilms and nutrient removal from wastewater
2011. Poster : IWA Biofilm Conference 2011, Shanghai, October 27-30, 2011. p. 106 - 107.Reductive dechlorination of tetrachloroethene by a stepwise catalysis of different organohalide respiring bacteria and reductive dehalogenases
Biodegradation. 2011. DOI : 10.1007/s10532-011-9454-4.Evaluation of silicate minerals for acid neutralization during bioremediation of high concentrations of chlorinated ethenes
2011Influence of pH on dehalogenating bacteria for bioremediation of chlorinated solvents
4th Swiss Microbial Ecology (SME) Meeting, Engelberg, Switzerland, February 2-4, 2011.Utilization of silicate minerals for pH control during in situ bioremediation of chlorinated solvent
5 th European Bioremediation Conference, Chania, Crete, Greece, July, 4-7,2011.Who will clean up the environment from polychlorinated biphenyls?
FEMS Microbiology Ecology : Ecology of Soil Microorganisms, Prague, Czech Republic, 27.4. - 1.5. 2011.Physiological adaptation of Desulfitobacterium hafniense strain TCE1 to tetrachloroethene respiration
Applied and Environmental Microbiology. 2011. DOI : 10.1128/AEM.02471-10.Multi-parameter study on the start-up phase in aerobic granular sludge technology for wastewater treatment
2011Effect of heterogeneity on enhanced reductive dechlorination: Analysis of remediation efficiency and groundwater acidification
AGU Fall meeting 2011, San Francisco, California, USA, December 5-9, 2011.The RdhT protein family: chaperoning bacterial organohalide respiration
7th European Workshop on Bacterial Respiratory Chain, Höör, Sweden, May 11-15, 2011.Optimisation des tests standardisés de digestibilité dans des réacteurs batch
2011Nitrogen removal from digested manure in a simple one-stage process
Water Science & Technology. 2011. DOI : 10.2166/wst.2011.430.Performance and microbial community composition dynamics of aerobic granular sludge from sequencing batch bubble column reactors operated at 20, 30, and 35°
Applied Microbiology and Biotechnology. 2010. DOI : 10.1007/s00253-010-2621-4.Purification & characterization of PceC protein involved in dehalorespiration by desulfitobacterium & dehalobacter
SSM, 69th Annual Assembly, Zurich, June 24-25, 2010.Buffering agent for pH control during in situ bioremediation of chlorinated solvent source zones
SGM Annual congress 2010, Zurich, June 24-25, 2010.The carbon source governs the population dynamics of phosphate accumulating organisms in aerobic granules
SSM, 69th Assembly, Zurich, Switzerland, June 24-25, 2010.wo-Phase Cultivation Techniques for Hydrocarbon-Degrading Organisms
Microbiology of Hydrocarbons, Oils, Lipids and Derived Compounds; Springer, 2010. p. 3919 - 3926.PREDOMINANCE OF ZOOGLOEA SP. DURING AEROBIC GRANULAR SLUDGE BIOFILMS DEVELOPMENT FOR WASTEWATER TREATMENT
SSM, 69th Annual Assembly, Zurich, Switzerland, June, 24-25, 2010.Bacterial life in a stagnant PCE-contaminated aquifer
SSM, 69th Annual Assembly, Zurich, June 24-25, 2010.Survey of one-carbon metabolism in Desulfitobacteria
Gordon Research conference on Molecultar Basis of Microbial One-Carbon Metabolism, Lewiston, Maine, UA, August 1-6, 2010.GENETIC INSTABILITY OF THE DEHALORESPIRATION PROCESS IN DESULFITOBACTERIUM HAFNIENSE STRAIN TCE1
SOCIETE SUISSE DE MICROBIOLOGIE, 69 Annual Meeting, Zurich, Suisse, June, 24-25, 2010.Bacterial communities associated with chloroethene–contaminated aquifers present both geographical isolation and strong correlations to local environmental variables
Symposium on Soil Metagenomics, Braunschweig, Germany, December 8-10, 2010.MICROBIAL AND BIOMOLECULAR HETEROGENEITY OF AEROBIC GRANULES WITHIN A SINGLE BIOREACTOR ?
SSM, 69th Annual Assembly, Zurich, June 24-25, 2010.WHO IS INTERESTED IN THE REDUCTIVE DECHLORINATION OF POLYCHLORINATED BIPHENYLS (PCBs)?
SSM, 69th Annual Assembly, Zurich, June 24-25, 2010.Biochemistry of Microbial Degradation of Hexachlorocyclohexane and Prospects for Bioremediation
Microbiology and Molecular Biology Reviews. 2010. DOI : 10.1128/MMBR.00029-09.Influence of pH on dehalorespiring consortia & first steps in the development of a methodology for acid neutralization in enhanced in situ bioremediation
2010Buffering soil-water acidity in chlorinated solvent bioremediation schemes
2010. 19th World Congress of Soil Science, Brisbane, Queensland, Australia, August 1-6, 2010. p. 27 - 30.Biogeography and spatial variability of bacterial communities associated with chloroethene – contaminated aquifers
FEMS, 3rd Congress of European Microbiologists, Gothenburg, Sweden, June 28-July 2, 2009.Influence of Mass-Transfer Limitations on Carbon Isotope Fractionation during Microbial Dechlorination of Trichloroethene
Environmental Science & Technology. 2009. DOI : 10.1021/es901481b.THE CHOICE OF INOCULUM IS KEY FOR THE FORMATION OF DENSE FAST-SETTLING AEROBIC GRANULAR SLUDGE
SSM Congrès annuel 2009, Lausanne, June 4-5, 2009.Microbial community evolution in a marine shore porphyry tailings deposit throughout wetland remediation
FEMS, 3rd Congress of European Microbiologists, Gothenburg, Sweden, June 28 - July 2, 2009.Influence of environmental factors on the structures of bacterial communities in a chloroethene – contaminated aquifer
Goldschmidt 2009, Davos, June 21-26, 2009.Detection and Quantification of Bacteria Involved in Aerobic and Anaerobic Ammonium Oxidation in an Ammonium-Contaminated Aquifer
Bioremediation Journal. 2009. DOI : 10.1080/10889860802690562.Molecular and biochemical aspects of the chloroethene dehalorespiration process
Eawag Seminar Series in Environmental Microbiology, Dübendorf, Switzerland, October 20, 2009.Fuel bioethanol production from whey permeate
Lausanne, EPFL, 2009. DOI : 10.5075/epfl-thesis-4372.Comparison of the denitrification potential of aerobic granules cultivated with acetate and propionate
2009. Poster : Biofilm 2009, Davis, Californie, USA, September 13-16, 2009.Maturation and Export of the Corrinoid-Containing Tetrachloroethene Reductive Dehalogenase
Gordon Research Conference on Corrinoids, Oxford, England, August 2-6, 2009.N-removal optimization by various aeration strategies
2009Méthodologie d'évaluation des facteurs de succès et d'échec des stations de traitement des eaux usées et des boues de vidange à grande échelle - A methodology to evaluate succes or failure of full-scale wasterwater and faecal sludge treatment systems
2009Advantages and limits of co-digestion in wastewater treatment plants – comparison to co-digestion in agriculture
2009Study of the microbial communities of core and water samples in a chloroethenes contaminated aquifer
2009B12-BIOSYNTHESIS IN THE TETRACHLOROETHENE-RESPIRING OBLIGATE ANAEROBE DESULFITOBACTERIUM
68th Annual Assembly of the SSM, Lausanne, June 4-5, 2009.BIOGEOGRAPHY AND SPATIAL VARIABILITY OF BACTERIAL COMMUNITIES ASSOCIATED WITH CHLOROETHENE – CONTAMINATED AQUIFERS
68th Annual Assembly of SSM, UNIL, Lausanne, June 04-05, 2009.Proposal of biostimulation for hexachlorocyclohexane (HCH)-decontamination and characterization of culturable bacterial community from high-dose point HCH-contaminated soils
Journal of Applied Microbiology. 2009. DOI : 10.1111/j.1365-2672.2008.03982.x.Elaboration d'outils pour l'investigation et l'assainissement des stands de tirs
2009The choice of inoculum is key for aerobic granular sludge process development
Oral presentation : IWA Biofilms Conference, Davis, USA, September 13-16 2009.Identification and characterization of proteins supporting dehalorespiration in Desulfitobacterium hafniense strain TCE1
Lausanne, EPFL, 2009. DOI : 10.5075/epfl-thesis-4472.DENITRIFYING PAO AND GAO IN AEROBIC GRANULAR BIOFILM CULTIVATED WITH ACETATE AND PROPIONATE
SSM Annual Assembly, Lausanne, June 04-05 2009.Comparative study of environmental impacts of imported organic products and regional conventional products – Geneva's case
2009THE TWIN-ARGININE TRANSLOCATION PATHWAY IN THE OBLIGATE ANAEROBE DESULFITOBACTERIUM
SSM annual congress, Lausanne, June 4-5, 2009.TsrE: a sulfur-transferase involved in various anaerobic respiration pathways ?
EMBO Workshop on Microbial Sulfur Metabolisme (WMSM 2009), Tomar, Portual, Mars 15-18 2009.BACTERIAL COMMUNITIES IN A CONTAMINATED AQUIFER: INFLUENCE OF ENVIRONMENTAL VARIABLES
SSM Annual Assembly 2009, Lausanne, June 4-5, 2009.Bioprocédés intégrés et innovateurs pour la dépollution des eaux
2e Symposium International sur les Biotechnologies environnementales, El Jadida, Marocco, December 14-15, 2009.Microbial processes in aerobic granules - can we use them to treat wastewater more efficiently?
67th Annual Assembly of the Swiss Society of Microbiology (SSM), Interlaken, Switzerland, June 12-13, 2008.New Metabolites in the Degradation of α- and γ-Hexachlorocyclohexane (HCH): Pentachlorocyclohexenes Are Hydroxylated to Cyclohexenols and Cyclohexenediols by the Haloalkane Dehalogenase LinB from Sphingobium indicum B90A
Journal of Agricultural and Food Chemistry. 2008. DOI : 10.1021/jf800465q.LCA and contaminated sites
2008Molecular and biochemical aspects of the chloroethene dehalorespiration process
IUMS 2008: XII International Congress on Bacteriology and Applied Microbiology, Istanbul, Turkey, August 5-9, 2008.The genus Dehalobacter
The Bergey's Manual; Springer, 2008. p. 986 - 987..Développement et validation de l'extraction in situ d'éthanol sur culture mixte à partir de perméat de petit-lait
2008Aerobic granular sludge reactor technology - Aerobic granulation with different substrates
2008Enhanced biodegradation of hexachlorocyclohexane (HCH) in contaminated soils via inoculation with Sphingobium indicum B90A
Biodegradation. 2008. DOI : 10.1007/s10532-007-9112-z.Influences des variables géologiques sur la structure de communautés bactériennes impliquées dans la déhalogenation réductrice des éthènes chlores dans un aquifère contaminé
2008Aerobic granular sludge formation and performance at 30 and 35°C in sequencing batch bubble-column reactors
IWA Biofilm Technologies Conference, Singapore, January 8-10, 2008.Développement d’un concept combiné de production de biogaz et d’élimination de l’ammoniac appliqué aux affluents agricoles
2007Microbial communities in a porphyry copper tailings impoundment and their impact on the geochemical dynamics of the mine waste
Environmental Microbiology. 2007. DOI : 10.1111/j.1462-2920.2006.01138.x.Hydroxylated Metabolites of β- and δ-Hexachlorocyclohexane: Bacterial Formation, Stereochemical Configuration, and Occurrence in Groundwater at a Former Production Site
Environmental Science & Technology. 2007. DOI : 10.1021/es062908g.Nitrogen removal from digested manure to decrease ammoniac emissions from agriculture
IWA Workshop on Anaerobic Digestion in Mountain Area (and isolated rural zones), Chambéry, France, June 5-7, 2007.Influence of temperature and high acetate concentrations on methanogenensis in lake sediment slurries
FEMS Microbiology Ecology. 2007. DOI : 10.1111/j.1574-6941.2007.00389.x.Aerobic granular sludge reactor technology Aerobic granulation in bubble column reactor at unregulated temperature
2006Hydrogenases of the dehalorespiring bacterium Desulfitobacterium hafniense strain TCE1
Lausanne, EPFL, 2006. DOI : 10.5075/epfl-thesis-3427.Haloalkane Dehalogenase LinB is responsible for β- and δ-hexachlorocyclohexane transoformation in sphingobium indicum B90A
Applied and Environmental Microbiology. 2006. DOI : 10.1128/AEM.00192-06.Reductive dechlorination: result of horizontal gene transfer and common effort of different populations ?
International Symposium on Environmental Biotechnology, Leipzig, Germany, July 9-13, 2006.Indications for acquisition of reductive dehalogenase genes through horizontal gene transfer by Dehalococcoides ethenogenes strain 195
Applied And Environmental Microbiology. 2005. DOI : 10.1128/AEM.71.6.2955-2961.2005.Indication for horizontal transfer of reductive dehalogenase genes
BAGECO 8, Lyon, France, June 26-29, 2005.Indications for the acquisition of reductive dehalogenase genes by horizontal gene transfer
Gordon Research Conference on Corrinoids, Oxford, England, September 18-23, 2005.Molecular analysis of the biodiversity of protists in hydrocarbon-polluted and pristine soils
Lausanne, EPFL, 2005. DOI : 10.5075/epfl-thesis-3211.Enantioselective transformation of α-hexachlorocyclohexane by the dehydrochlorinases LinA1 and LinA2 from the soil bacterium Sphingomonas paucimobilis B90A
Applied and Environmental Microbiology. 2005. DOI : 10.1128/AEM.71.12.8514-8518.2005.Hexachlorocyclohexane-degrading bacterial strains Sphingomonas paucimobilis B90A, UT26 and Sp+, having similar lin genes, represent three distinct species, Sphingobium indicum sp. nov., Sphingobium japonicum sp. nov. and Sphingobium francense sp. nov., and reclassification of [Sphingomonas] chungbukensis as Sphingobium chungbukense comb. nov.
International Journal of Systematic and Evolutionary Microbiology. 2005. DOI : 10.1099/ijs.0.63201-0.Reductive dechlorination of chlorofluorocarbons and hydrochlorofluorocarbons in sewage sludge and aquifer sediment microcosms
Chemosphere. 2005. DOI : 10.1016/j.chemosphere.2005.02.087.Influence of nematodes grazing bacteria on biomass growth in a biotrickling filter treating chlorobenzenes
Biotechniques for Air Pollution Control, Coruna, Espagne, October 5-7 2005.Isolation and characterization of Tn-Dha1, a transposon containing the tetrachloroethene reductive dehalogenase of Desulfitobacterium hafniense strain TCE1
Environmental Microbiology. 2005. DOI : 10.1111/j.1462-2920.2004.00671.x.Assessment of microbial community changes and limiting factors during bioremediation of hydrocarbon-polluted soil with new miniaturized physiological methods
Lausanne, EPFL, 2004. DOI : 10.5075/epfl-thesis-2972.Fate of volatile fluorinated compounds in the subsurface
Lausanne, EPFL, 2004. DOI : 10.5075/epfl-thesis-3025.Molekulare Detektion von Chlorethen-dechlorierenden Bakterien und Enzymen in Umweltproben und Mikrokosmen
DECHEMA Tagung des Interdisziplinären Arbeitskreises "Umweltbiotechnologie-Boden", Frankfurt, Germany, February, 26-27, 2004.Dehalogenation by anaerobic bacteria
Dehalogenation: Microbial processes and environmental applications; Kluwer Academic Publisher, 2004. p. 115 - 157.Development of degenerate and specific PCR primers for the detection and isolation of known and putative chloroethene reductive dehalogenase genes
Journal Of Microbiological Methods. 2004. DOI : 10.1016/j.mimet.2003.09.019.Dynamics of multiple lin gene expression in Sphingomonas paucimobilis B90A in response to different hexachlorocyclohexane isomers
Applied And Environmental Microbiology. 2004. DOI : 10.1128/AEM.70.11.6650-6656.2004.Development of a real-time PCR method for quantification of the three genera Dehalobacter, Dehalococcoides, and Desulfitobacterium in microbial communities
Journal Of Microbiological Methods. 2004. DOI : 10.1016/j.mimet.2004.02.003.Organization of lin genes and IS6100 among different strains of hexachlorocyclohexane-degrading Sphingomonas paucimobilis: Evidence for horizontal gene transfer
Journal Of Bacteriology. 2004. DOI : 10.1128/JB.186.8.2225-2235.2004.Steady-state and transient-state performance of a biotrickling filter treating chlorobenzene-containing waste gas
Applied Microbiology And Biotechnology. 2004. DOI : 10.1007/s00253-003-1531-0.Molecular characterization of key enzymes involved in dehalorespiration with tetrachloroethene
Lausanne, EPFL, 2004. DOI : 10.5075/epfl-thesis-3105.Genetic structure and possible rearrangement around the tetrachloroethene productive dehalogenase gene of Desulfitobacterium frappieri strain TCE1
Characterization of the corrinoid iron-sulfur protein tetrachloroethene reductive dehalogenase of Dehalobacter restrictus
Applied And Environmental Microbiology. 2003. DOI : 10.1128/AEM.69.8.4628-4638.2003.Performance of a biotrickling filter treating a chlorobenzene-contaminated waste gas
Biogas reactor performance and methanogenic microbial community shifts due to a sudden change of the substrate composition
Real-Time PCR in molecular ecology: pitfalls for absolute quantification
Ecophysiology and molecular identification of microbial populations involved in the reductive dechlorination of chloroethenes
Lausanne, EPFL, 2003. DOI : 10.5075/epfl-thesis-2898.Detection of the activity of specific tetrachlorethene-dechlorinating bacteria in environmental samples
Joint Annual Meeting, Swiss Society for Microbiology, Swiss Society for Infectious Diseases, Swiss Society of Tropical Medicine and Parasitology, SSID, Basel, 6-7 March 2003.Ni-FeHydrogenases of dehalorespiring bacteria form a distinct group within this enzyme family
Kann molekulare Detektion von spezifischen Bakterien- und Enzymsequenzen helfen Grundwasserleiter zu sanieren?
Evidence for the Existence of Psychrophilic Methanogenic Communities in Anoxic Sediments of Deep Lakes
Applied and Environmental Microbiology. 2003. DOI : 10.1128/AEM.69.3.1832-1835.2003.Single Strand Conformation Polymorphism (SSCP) to assess the bioremediation potential of tetrachloroethene-contaminated sites
Molecular characterization of the tetrachloroethene reductive dehalogenase of Dehalobacter restrictus
Detection of key players and their activity involved in reductive dechlorination of chloroethenes
Characterization of enrichment cultures dechlorinating chloroethenes to vinyl chloride and ethene
Le lagunage à laitue d'eau (Pistia stratiotes) à Ouagadougou: une alternative pour l'épuration des eaux usées destinées à l'irrigation
Cahiers Agricultures. 2002.Assessing design criteria for water lettuce-based wastewater treatment system for BOD 5 removal under Sahelian climate conditions
2002. p. 191 - 199.Hydrogenases in dehalorespiring bacteria
61st Annual Assembly of Swiss Society for Microbiology, focused on Water, Luzern, Feb 20/21, 2002.Are Tetrachloroethene Reductive Dehalogenases located on Catabolic Islands?
Detection of the activity of specific tetrachloroethene-dechlorinating bacteria in environmental samples
Cloning and Characterization of lin Genes Responsible for the Degradation of Hexachlorocyclohexane Ismomers by Sphingomonas paucimobilis Strain B90
Applied and Environmental Microbiology. 2002. DOI : 10.1128/AEM.68.12.6021-6028.2002.Molecular detection of chloroethene reductive dehaologenases in environmental samples
Detection of key organisms and enzymes involved in reductive dechlorination of chloroethenes
Detection of the activity of tetrachloroethene-dechlorinating bacteria in envrionmental samples
Etats des lieux du lagunage en Afrique de l'ouest et du centre. Review of wastewater stabilization ponds performances in West and Central Africa.
2002. p. 698 - 707.Epuration des eaux usées par lagunage à microphytes et à macrophytes en Afrique de l'Ouest et du Centre : état des lieux, performances épuratoires et critères de dimensionnement
Lausanne, EPFL, 2002. DOI : 10.5075/epfl-thesis-2653.Molecular characterization of enrichment cultures dechlorinating chloroethenes to vinyl chloride or ethene
Hydrogenases in dehalorespiring bacteria
Workshop der Fachgruppe "Umweltmikrobiologie" der VAAM: "Anaerober Abbau von Umweltschadstoffen", Stuttgart/Germany, 5/6 Dezember 2002.Natural wastewater treatment by water lettuce for irrigation water reuse in Burkina Faso
Nitrogen source effect on the microbial community that removes chloro- and dichlorobenzene in a biotrickling filter
Molecular Detection of Tetrachloroethene-Dechlorinating Bacteria in Environmental Samples
Evaluation of kinetic coefficients using integrated Monod and Haldane models for low-temperature acetoclastic methanogenesis
Water Research. 2001. DOI : 10.1016/S0043-1354(00)00595-9.Hydrogenase in the reduction of halogenated pollutants
Hydrogen as a Fuel: Learning from Nature; Taylor & Francis, 2001.Characterization and detection of chloroethene reductive dehalogenases in environmental samples
Composition and dynamics of a chlorobenzene-degrading microbial community growing in a biotrickling filter
Reductive dechlorination of chloroethenes: Who is catalyzing the dechlorination of dichloroethene and vinyl chloride?
2001. p. 107 - 109.Degradation of hexachlorocyclohexane by Sphingomonas paucimobilis in soil microcosms
Characterization of the tetrachloroethene reductive dehalogenase of Dehalobacter restrictus
Dehalorespiration: an exciting biological phenomenon that helps to remediate contaminated aquifers
Le lagunage à macrophytes et l'irrigation en maraîchage: Etude d'une station expérimentale à Ouagadougou
Info CREPA, 03 BP 7112 Ouagadougou 03, Burkina Faso. 2001.Selective enrichment of reductive dechlorination of dichloroethene and vinyl chloride by secondary hydrogen donors
Tetrachloroethene dechlorination in environmental samples: Molecular detection of responsible bacteria and their activity
Chlorobenzene-degrading microbial commmunity growing in a biotrickling filter
Anaerobic production and degradation of volatile fatty acids at low temperture
2000. p. 270 - 273.A biotrickling filter to treat chlorobenzene-contaminated waste gas: Inoculum production, performance, and bacteria involved
2000. p. 105 - 108.Dégradation des chloroéthènes par des micro-organismes anaérobies
Bacterial Community Dynamics in a Biotrickling Filter System Treating Chlorobenzenes-Contaminated Waste Gas
Environmental engineering education - summary report of the 1st European Seminar
Water Science and Technology. 2000. DOI : 10.2166/wst.2000.0036.Schadstoffe und anaerobe Mikroorganismen : Das noch wenig genutzte Potential.
Biotechnologie im Umweltschutz. Bioremediation: Entwicklungsstand - Anwendungen - Perspektiven.; Berlin: Erich-Schmidt-Verlag, 1999. p. 117 - 123.Treatment of Waste Gas Containing Chlorobenzenes in a Bio-trickling Filter
1999. p. 53 - 60.Vertical Distribution of Methanogens in the Anoxic Sediment of Rotsee (Switzerland)
Applied and Environmental Microbiology. 1999. DOI : 10.1128/AEM.65.6.2402-2408.1999.Complete Reduction of TNT and Other (Poly)nitroaromatic Compounds under Iron-Reducing Subsurface Conditions
Environmental Science & Technology. 1999. DOI : 10.1021/es9809760.Performance Evaluation of a Biotrickling Filter Degrading Chlorobenzene Vapours
Reductive dechlorination in the energy metabolism of anaerobic bacteria
FEMS Microbiology Reviews. 1999. DOI : 10.1111/j.1574-6976.1998.tb00377.x.Pelagic Bacteria-Particle Interactions and Community-Specific Growth Rates in Four Lakes along a Trophic Gradient
Microbial Ecology. 1999. DOI : 10.1007/s002489900129.Optimisation of Bacterium Production Adapted to the Chlorobenzene Degradation
Enseignement & Phd
Doctorants
Rodilla Ramírez Pilar Natalia,A dirigé les thèses EPFL de
Adler Aline Sondra , Buttet Géraldine Florence , Cimmino Lorenzo , Gelb Arnaud Michel , Lacroix Elsa Marina , Lochmatter Samuel , Margot Jonas , Prat Laure , Rupakula Boyanapalli Aamani , Shani Noam , Weissbrodt David Gregory , Willemin Mathilde Stéphanie , de Glutz François-Nicolas ,Cours
Water and wastewater treatment
Le cours sur le traitement des eaux et des eaux usées montre les différentes méthodes et techniques applicables à l'élimination des polluants organiques, de l'azote et du phosphore des eaux usées et les méthodes et techniques physiques et chimiques applicables à la production de l'eau potable.