Henry Markram

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henry.markram@epfl.ch

EPFL SV BMI LNMC
AAB 1 10 (Bâtiment AAB)
Station 15
CH-1015 Lausanne

Site web: https://markram-lab.epfl.ch
Unité: LNMC

Site web: https://sv.epfl.ch/education
Unité: SSV-ENS

Site web: https://bluebrain.epfl.ch/
Unité: BBP-CORE

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Publications

Infoscience

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E. Iavarone; J. Yi; Y. Shi; B.-J. Zandt; C. O'Reilly et al. : Experimentally-constrained biophysical models of tonic and burst firing modes in thalamocortical neurons; PLoS Computational Biology. 2019-05-16. DOI : 10.1371/journal.pcbi.1006753.

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X. Fan; H. Markram : A Brief History of Simulation Neuroscience; Frontiers In Neuroinformatics. 2019-05-07. DOI : 10.3389/fninf.2019.00032.

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C. Colangelo; P. Shichkova; D. Keller; H. Markram; S. Ramaswamy : Cellular, Synaptic and Network Effects of Acetylcholine in the Neocortex; Frontiers In Neural Circuits. 2019-04-12. DOI : 10.3389/fncir.2019.00024.

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C. Ero; M.-O. Gewaltig; D. Keller; H. Markram : A Cell Atlas for the Mouse Brain (vol 12, 84, 2018); Frontiers In Neuroinformatics. 2019-02-19. DOI : 10.3389/fninf.2019.00007.

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J. S. Coggan; C. Cali; D. Keller; M. Agus; D. Boges et al. : A Process for Digitizing and Simulating Biologically Realistic Oligocellular Networks Demonstrated for the Neuro-Glio-Vascular Ensemble; Frontiers In Neuroscience. 2018-09-25. DOI : 10.3389/fnins.2018.00664.

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R. Migliore; C. A. Lupascu; L. L. Bologna; A. Romani; J.-D. Courcol et al. : The physiological variability of channel density in hippocampal CA1 pyramidal cells and interneurons explored using a unified data-driven modeling workflow; Plos Computational Biology. 2018-09-01. DOI : 10.1371/journal.pcbi.1006423.

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M. Abdellah; J. Hernando; S. Eilemann; S. Lapere; N. Antille et al. : NeuroMorphoVis: a collaborative framework for analysis and visualization of neuronal morphology skeletons reconstructed from microscopy stacks; BIOINFORMATICS. 2018. DOI : 10.1093/bioinformatics/bty231.

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L. Kanari; P. Dlotko; M. Scolamiero; R. Levi; J. Shillcock et al. : A Topological Representation of Branching Neuronal Morphologies; NEUROINFORMATICS. 2018. DOI : 10.1007/s12021-017-9341-1.

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M. Doron; G. Chindemi; E. Muller; H. Markram; I. Segev : Timed Synaptic Inhibition Shapes NMDA Spikes, Influencing Local Dendritic Processing and Global I/O Properties of Cortical Neurons; Cell Reports. 2017. DOI : 10.1016/j.celrep.2017.10.035.

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M. Abdellah; J. Hernando; N. Antille; S. Eilemann; H. Markram et al. : Reconstruction and visualization of large-scale volumetric models of neocortical circuits for physically-plausible in silico optical studies; Bmc Bioinformatics. 2017. DOI : 10.1186/s12859-017-1788-4.

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M. W. Reimann; A.-L. Horlemann; S. Ramaswamy; E. B. Muller; H. Markram : Morphological Diversity Strongly Constrains Synaptic Connectivity and Plasticity; Cerebral Cortex. 2017. DOI : 10.1093/cercor/bhx150.

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J. Coggan; D. Keller; C. Cal; H. Lehvaslaiho; F. Schurmann et al. : Modeling the metabolic response of astrocytes to neuronal activity. 2017. 13th European Meeting on Glial Cells in Health and Disease, Edinburgh, SCOTLAND, JUL 08-11, 2017. p. E280-E280.

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M. W. Reimann; M. Nolte; M. Scolamiero; K. Turner; R. Perin et al. : Cliques of Neurons Bound into Cavities Provide a Missing Link between Structure and Function; Frontiers In Computational Neuroscience. 2017. DOI : 10.3389/fncom.2017.00048.

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E. Gal; M. London; A. Globerson; S. Ramaswamy; M. W. Reimann et al. : Rich cell-type-specific network topology in neocortical microcircuitry; Nature Neuroscience. 2017. DOI : 10.1038/nn.4576.

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M. Abdellah; A. Bilgili; S. Eilemann; J. Shillcock; H. Markram et al. : Bio-physically plausible visualization of highly scattering fluorescent neocortical models for in silico experimentation; Bmc Bioinformatics. 2017. DOI : 10.1186/s12859-016-1444-4.

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O. Amsalem; W. Van Geit; E. Muller; H. Markram; I. Segev : From Neuron Biophysics to Orientation Selectivity in Electrically Coupled Networks of Neocortical L2/3 Large Basket Cells; Cerebral Cortex. 2016. DOI : 10.1093/cercor/bhw166.

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J. V. Raimondo; H. Tomes; A. Irkle; L. Kay; L. Kellaway et al. : Tight Coupling of Astrocyte pH Dynamics to Epileptiform Activity Revealed by Genetically Encoded pH Sensors; Journal Of Neuroscience. 2016. DOI : 10.1523/Jneurosci.0664-16.2016.

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W. Van Geit; M. Gevaert; G. Chindemi; C. Roessert; J.-D. Courcol et al. : BluePyOpt: Leveraging Open Source Software and Cloud Infrastructure to Optimise Model Parameters in Neuroscience; Frontiers In Neuroinformatics. 2016. DOI : 10.3389/fninf.2016.00017.

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M. Reimann; H. Markram; F. Schürmann; E. B. Muller; S. Hill et al. ; Structural to functional synaptic conversion. US9165244 ; US2014108315 . 2015.

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M. Abdellah; A. Bilgili; S. Eilemann; H. Markram; F. Schürmann : Physically-based in silico light sheet microscopy for visualizing fluorescent brain models; BMC bioinformatics. 2015. DOI : 10.1186/1471-2105-16-S11-S8.

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S. Ramaswamy; J.-D. Courcol; M. Abdellah; S. R. Adaszewski; N. Antille et al. : The neocortical microcircuit collaboration portal: a resource for rat somatosensory cortex; Frontiers In Neural Circuits. 2015. DOI : 10.3389/fncir.2015.00044.

Notice détaillée - Texte intégral

M. W. Reimann; J. G. King; E. B. Muller; S. Ramaswamy; H. Markram : An algorithm to predict the connectome of neural microcircuits; Frontiers In Computational Neuroscience.

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Henry Markram

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