Henry Markram
EPFL SV BMI LNMC
AAB 1 10 (Bâtiment AAB)
Station 15
1015 Lausanne
Web site: Site web: https://markram-lab.epfl.ch
+41 21 693 95 36
EPFL
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Web site: Site web: https://sv.epfl.ch/education
Publications
Publications Infoscience
Infoscience
Principles of inter-areal interactions in cortical sensory processing
Lausanne, EPFL, 2025. DOI : 10.5075/epfl-thesis-10154.Computational Generation of Long-range Axonal Morphologies
NEUROINFORMATICS. 2025. DOI : 10.1007/s12021-024-09696-0.Cell density quantification of high resolution Nissl images of the juvenile rat brain
Frontiers In Neuroanatomy. 2024. DOI : 10.3389/fnana.2024.1463632.Modeling and Simulation of Neocortical Micro- and Mesocircuitry. Part I: Anatomy
eLife. 2024. DOI : 10.7554/eLife.99688.2.Sex dimorphism in rodent brain responses to ketogenic diets: A comparative study
2024Modeling of blood flow dynamics in the rat somatosensory cortex
2024An extended and improved CCFv3 annotation and Nissl atlas of the entire mouse brain
2024Modeling and simulation of neocortical micro- and mesocircuitry. Part II: Physiology and experimentation
Elife. 2024. DOI : 10.7554/eLife.99693.1.sa2.Simplification of spiking neural network models
US2024370713 . 2024.Community-based reconstruction and simulation of a full-scale model of region CA1 of rat hippocampus.
PLOS Biology. 2024. DOI : 10.1371/journal.pbio.3002861.Brain Metabolism in Health and Neurodegeneration: The Interplay Among Neurons and Astrocytes
Cells. 2024. DOI : 10.3390/cells13201714.Generating brain-wide connectome using synthetic axonal morphologies
2024Deep learning for classifying neuronal morphologies: combining topological data analysis and graph neural networks
2024BlueCelluLab: Biologically Detailed Neural Network Experimentation API
Journal of Open Source Software. 2024. DOI : 10.21105/joss.07026.Structural and molecular characterization of astrocyte and vasculature connectivity in the mouse hippocampus and cortex
Glia. 2024. DOI : 10.1002/glia.24594.Fear learning induces synaptic potentiation between engram neurons in the rat lateral amygdala
Nature Neuroscience. 2024. DOI : 10.1038/s41593-024-01676-6.A multi-modal fitting approach to construct single-neuron models with patch clamp and high-density microelectrode arrays
Neural Computation. 2024. DOI : https://doi.org/10.1162/neco_a_01672.Of mice and men: Increased dendritic complexity gives rise to unique human networks
2024Coupled Electromagnetic-Electrophysiological Modeling of Neural Circuits
Lausanne, EPFL, 2024. DOI : 10.5075/epfl-thesis-11176.A universal workflow for creation, validation and generalization of detailed neuronal models
Patterns. 2023. DOI : 10.1016/j.patter.2023.100855.Controlling morpho-electrophysiological variability of neurons with detailed models
Iscience. 2023. DOI : 10.1016/j.isci.2023.108222.Cell-type-specific densities in mouse somatosensory cortex derived from scRNA-seq and in situ RNA hybridization
Frontiers In Neuroanatomy. 2023. DOI : 10.3389/fnana.2023.1118170.Blue Brain Nexus: An open, secure, scalable system for knowledge graph management and data-driven science
Semantic Web. 2023. DOI : 10.3233/SW-222974.Mapping of morpho-electric features to molecular identity of cortical inhibitory neurons
Plos Computational Biology. 2023. DOI : 10.1371/journal.pcbi.1010058.Molecular reconstruction and simulation of the Neuron-Glia-Vasculature system
Lausanne, EPFL, 2023. DOI : 10.5075/epfl-thesis-9336.Ultraliser: a framework for creating multiscale, high-fidelity and geometrically realistic 3D models for in silico neuroscience
Briefings In Bioinformatics. 2023. DOI : 10.1093/bib/bbac491.Digital reconstruction of the mammalian spinal cord: from anatomical reference volume to cell type atlas of the mouse spinal cord
Lausanne, EPFL, 2023. DOI : 10.5075/epfl-thesis-9198.Simulating Temporal Interference Stimulation
2023. p. S66 - S66.Thalamic control of sensory processing and spindles in a biophysical somatosensory thalamoreticular circuit model of wakefulness and sleep
Cell Reports. 2023. DOI : 10.1016/j.celrep.2023.112200.Principles of Network Plasticity in Neocortical Microcircuits
Lausanne, EPFL, 2023. DOI : 10.5075/epfl-thesis-10137.A theory of memory consolidation and synaptic pruning in cortical circuits
Lausanne, EPFL, 2023. DOI : 10.5075/epfl-thesis-10094.Breakdown and rejuvenation of aging brain energy metabolism
2023Overexpression of UCP4 in astrocytic mitochondria prevents multilevel dysfunctions in a mouse model of Alzheimer's disease
Glia. 2022. DOI : 10.1002/glia.24317.A method to estimate the cellular composition of the mouse brain from heterogeneous datasets
Plos Computational Biology. 2022. DOI : 10.1371/journal.pcbi.1010739.Neuromodulatory organization in the developing rat somatosensory cortex
2022Optimum trajectory learning in musculoskeletal systems with model predictive control and deep reinforcement learning
Biological Cybernetics. 2022. DOI : 10.1007/s00422-022-00940-x.Strong and reliable synaptic communication between pyramidal neurons in adult human cerebral cortex
Cerebral Cortex. 2022. DOI : 10.1093/cercor/bhac246.A calcium-based plasticity model for predicting long-term potentiation and depression in the neocortex
Nature Communications. 2022. DOI : 10.1038/s41467-022-30214-w.Representing stimulus information in an energy metabolism pathway
Journal Of Theoretical Biology. 2022. DOI : 10.1016/j.jtbi.2022.111090.Computational synthesis of cortical dendritic morphologies
Cell Reports. 2022. DOI : 10.1016/j.celrep.2022.110586.Data-driven whole mouse brain modeling for multi-scale simulations
Lausanne, EPFL, 2022. DOI : 10.5075/epfl-thesis-8715.Neuromodulation of neocortical microcircuitry: a multi-scale framework to model the effects of cholinergic release
Lausanne, EPFL, 2022. DOI : 10.5075/epfl-thesis-8866.Reconstruction of the Hippocampus
Computational Modelling of the Brain: Modelling Approaches to Cells, Circuits and Networks; Springer, 2022.Computational modelling of a mouse layer 5 pyramidal neuron using genetic ion channels
2021. 30th Annual Computational Neuroscience Meeting, [virtual event], 2021-07-03 - 2021-07-07. p. S123 - S123.Building somatosensory cortex neuron models using a workflow for the creation, validation and generalization of biophysically detailed cell models
2021. 30th Annual Computational Neuroscience Meeting, [virtual event], 2021-07-03 - 2021-07-07. p. S122 - S123.Extracellular stimulation and Local Field Potential recording in a L5 PC model with full axonal arbor
2021. 30th Annual Computational Neuroscience Meeting, [virtual event], 2021-07-03 - 2021-07-07. p. S123 - S124.Digital Reconstruction of the Neuro-Glia-Vascular Architecture
Cerebral Cortex. 2021. DOI : 10.1093/cercor/bhab254.A Standardized Brain Molecular Atlas: A Resource for Systems Modeling and Simulation
Frontiers In Molecular Neuroscience. 2021. DOI : 10.3389/fnmol.2021.604559.Morphology, physiology and synaptic connectivity of local interneurons in the mouse somatosensory thalamus
Journal Of Physiology. 2021. DOI : 10.1113/JP281711.The Role of Hub Neurons in Modulating Cortical Dynamics
Frontiers In Neural Circuits. 2021. DOI : 10.3389/fncir.2021.718270.A Machine-Generated View of the Role of Blood Glucose Levels in the Severity of COVID-19
Frontiers In Public Health. 2021. DOI : 10.3389/fpubh.2021.695139.Supervised Learning With Perceptual Similarity for Multimodal Gene Expression Registration of a Mouse Brain Atlas
Frontiers In Neuroinformatics. 2021. DOI : 10.3389/fninf.2021.691918.Metaball skinning of synthetic astroglial morphologies into realistic mesh models for visual analytics and in silico simulations
Bioinformatics. 2021. DOI : 10.1093/bioinformatics/btab280.In silico voltage-sensitive dye imaging reveals the emergent dynamics of cortical populations
Nature Communications. 2021. DOI : 10.1038/s41467-021-23901-7.ARC: An Open Web-Platform for Request/Supply Matching for a Prioritized and Controlled COVID-19 Response
Frontiers In Public Health. 2021. DOI : 10.3389/fpubh.2021.607677.Structural architecture of the Neuronal-Glial-Vascular system
Lausanne, EPFL, 2021. DOI : 10.5075/epfl-thesis-7480.Synthesis of branching morphologies
US2022414436 ; EP4032103 ; CN114787939 ; KR20220084391 ; WO2021078588 . 2021.Thalamic microcircuitry: neurons, synapses, and circuit motifs in receptive field structure and sensory processing
Lausanne, EPFL, 2021. DOI : 10.5075/epfl-thesis-7614.Interactive visualization and analysis of morphological skeletons of brain vasculature networks with VessMorphoVis
Bioinformatics. 2020. DOI : 10.1093/bioinformatics/btaa461.Excitation states of metabolic networks predict dose-response fingerprinting and ligand pulse phase signalling
Journal Of Theoretical Biology. 2020. DOI : 10.1016/j.jtbi.2019.110123.A Kinetic Map of the Homomeric Voltage-gated Potassium Channel (Kv) Family
2020. 64th Annual Meeting of the Biophysical-Society, San Diego, CA, Feb 15-19, 2020. p. 108A - 108A. DOI : 10.1016/j.bpj.2019.11.739.Neuron Geometry Underlies Universal Network Features in Cortical Microcircuits
2020Data driven building of realistic neuron model using IBEA and CMA evolution strategies
2020. GECCO '20: Genetic and Evolutionary Computation Conference, Cancún, Mexico, July 8 - 12, 2020. p. 35 - 36. DOI : 10.1145/3377929.3398161.Impact of higher order network structure on emergent cortical activity
Network Neuroscience. 2020. DOI : 10.1162/netn_a_00124.Estimating the Readily-Releasable Vesicle Pool Size at Synaptic Connections in the Neocortex
Frontiers In Synaptic Neuroscience. 2019. DOI : 10.3389/fnsyn.2019.00029.A null model of the mouse whole-neocortex micro-connectome
Nature Communications. 2019. DOI : 10.1038/s41467-019-11630-x.Caries Detection with Near-Infrared Transillumination Using Deep Learning
Journal of Dental Research. 2019. DOI : 10.1177/0022034519871884.Cortical reliability amid noise and chaos
Nature Communications. 2019. DOI : 10.1038/s41467-019-11633-8.A Kinetic Map of the Homomeric Voltage-Gated Potassium Channel (Kv) Family
Frontiers in Cellular Neuroscience. 2019. DOI : 10.3389/fncel.2019.00358.A Derived Positional Mapping of Inhibitory Subtypes in the Somatosensory Cortex
Frontiers In Neuroanatomy. 2019. DOI : 10.3389/fnana.2019.00078.Experimentally-constrained biophysical models of tonic and burst firing modes in thalamocortical neurons
PLoS Computational Biology. 2019. DOI : 10.1371/journal.pcbi.1006753.A Brief History of Simulation Neuroscience
Frontiers In Neuroinformatics. 2019. DOI : 10.3389/fninf.2019.00032.Cellular, Synaptic and Network Effects of Acetylcholine in the Neocortex
Frontiers In Neural Circuits. 2019. DOI : 10.3389/fncir.2019.00024.Objective Morphological Classification of Neocortical Pyramidal Cells
Cerebral Cortex. 2019. DOI : 10.1093/cercor/bhy339.Individual differences in sensory sensitivity: Further lessons from an Autism model
Cognitive Neuroscience. 2019. DOI : 10.1080/17588928.2019.1592143.Corrigendum: A Cell Atlas for the Mouse Brain
Frontiers In Neuroinformatics. 2019. DOI : 10.3389/fninf.2019.00007.In Silico Voltage-Sensitive Dye Imaging: A Model-Based Approach for Bridging Scales of Cortical Activity
Lausanne, EPFL, 2019. DOI : 10.5075/epfl-thesis-9848.Untangling emergent cortical dynamics: neurons from networks, noise from chaos
Lausanne, EPFL, 2019. DOI : 10.5075/epfl-thesis-9616.Reverse engineering the motor control system
Lausanne, EPFL, 2019. DOI : 10.5075/epfl-thesis-9599.A Cell Atlas for the Mouse Brain
Frontiers In Neuroinformatics. 2018. DOI : 10.3389/fninf.2018.00084.Cell Densities in the Mouse Brain: A Systematic Review
Frontiers In Neuroanatomy. 2018. DOI : 10.3389/fnana.2018.00083.Data-Driven Modeling of Cholinergic Modulation of Neural Microcircuits: Bridging Neurons, Synapses and Network Activity
Frontiers In Neural Circuits. 2018. DOI : 10.3389/fncir.2018.00077.A Process for Digitizing and Simulating Biologically Realistic Oligocellular Networks Demonstrated for the Neuro-Glio-Vascular Ensemble
Frontiers In Neuroscience. 2018. DOI : 10.3389/fnins.2018.00664.The physiological variability of channel density in hippocampal CA1 pyramidal cells and interneurons explored using a unified data-driven modeling workflow
Plos Computational Biology. 2018. DOI : 10.1371/journal.pcbi.1006423.Microcircuitry of the neocortex
Handbook of Brain Microcircuits; Oxford University Press, 2018. p. 35 - 46.Generating and identifying functional subnetworks within structural networks
US2023297808 ; US11615285 ; US2018197069 . 2018.Neuronal morphologies: the shapes of thoughts
Lausanne, EPFL, 2018. DOI : 10.5075/epfl-thesis-8255.Data-driven reconstruction of a point neuron mouse brain
Lausanne, EPFL, 2018. DOI : 10.5075/epfl-thesis-8962.Simplification of neural network models
US11983620 ; US2022230052 ; US11301750 ; US2018285716 . 2018.Towards a unified understanding of synaptic plasticity : parsimonious modeling and simulation of the glutamatergic synapse life-cycle
Lausanne, EPFL, 2018. DOI : 10.5075/epfl-thesis-8186.Norepinephrine stimulates glycogenolysis in astrocytes to fuel neurons with lactate
PLOS Computational Biology. 2018. DOI : 10.1371/journal.pcbi.1006392.Reconstruction and simulation of neocortical microcircuitry
US11817220 ; US2018101660 . 2018.Reconstruction and visualization of large-scale volumetric models of neocortical circuits for physically-plausible in silico optical studies
Bmc Bioinformatics. 2017. DOI : 10.1186/s12859-017-1788-4.Using the Green's function to simplify and understand dendrites
Lausanne, EPFL, 2017. DOI : 10.5075/epfl-thesis-7869.Modeling the metabolic response of astrocytes to neuronal activity
2017. 13th European Meeting on Glial Cells in Health and Disease, Edinburgh, SCOTLAND, JUL 08-11, 2017. p. E280 - E280.In Silico Brain Imaging Physically-plausible Methods for Visualizing Neocortical Microcircuitry
Lausanne, EPFL, 2017. DOI : 10.5075/epfl-thesis-8161.Rich cell-type-specific network topology in neocortical microcircuitry
Nature Neuroscience. 2017. DOI : 10.1038/nn.4576.Cliques of Neurons Bound into Cavities Provide a Missing Link between Structure and Function
Frontiers In Computational Neuroscience. 2017. DOI : 10.3389/fncom.2017.00048.A Physically Plausible Model for Rendering Highly Scattering Fluorescent Participating Media
2017Bio-physically plausible visualization of highly scattering fluorescent neocortical models for in silico experimentation
Bmc Bioinformatics. 2017. DOI : 10.1186/s12859-016-1444-4.Morphological Diversity Strongly Constrains Synaptic Connectivity and Plasticity
Cerebral Cortex. 2017. DOI : 10.1093/cercor/bhx150.From Neuron Biophysics to Orientation Selectivity in Electrically Coupled Networks of Neocortical L2/3 Large Basket Cells
Cerebral Cortex. 2016. DOI : 10.1093/cercor/bhw166.Automated point-neuron simplification of data-driven microcircuit models
2016Agile in-litero experiments : how can semi-automated information extraction from neuroscientific literature help neuroscience model building?
Lausanne, EPFL, 2016. DOI : 10.5075/epfl-thesis-6809.Tight Coupling of Astrocyte pH Dynamics to Epileptiform Activity Revealed by Genetically Encoded pH Sensors
Journal Of Neuroscience. 2016. DOI : 10.1523/Jneurosci.0664-16.2016.The future of human cerebral cartography: a novel approach
Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences. 2015. DOI : 10.1098/rstb.2014.0171.An Exclusion Zone for Ca2+ Channels around Docked Vesicles Explains Release Control by Multiple Channels at a CNS Synapse
PLoS computational biology. 2015. DOI : 10.1371/journal.pcbi.1004253.An algorithm to predict the connectome of neural microcircuits
Frontiers In Computational Neuroscience. 2015. DOI : 10.3389/fncom.2015.00120.Network-timing-dependent plasticity
Frontiers in cellular neuroscience. 2015. DOI : 10.3389/fncel.2015.00220.Cell-type- and activity-dependent extracellular correlates of intracellular spiking
Journal of Neurophysiology. 2015. DOI : 10.1152/jn.00628.2014.Anti-Obesity and Anti-Hyperglycemic Effects of Cinnamaldehyde via altered Ghrelin Secretion and Functional impact on Food Intake and Gastric Emptying
Scientific Reports. 2015. DOI : 10.1038/srep07919.Predictable enriched environment prevents development of hyper-emotionality in the VPA rat model of autism
Frontiers in Neuroscience. 2015. DOI : 10.3389/fnins.2015.00127.A versatile clearing agent for multi-modal brain imaging
Scientific Reports. 2015. DOI : 10.1038/srep09808.Anatomy and physiology of the thick-tufted layer 5 pyramidal neuron
Frontiers In Cellular Neuroscience. 2015. DOI : 10.3389/fncel.2015.00233.Physically-based in silico light sheet microscopy for visualizing fluorescent brain models
BMC bioinformatics. 2015. DOI : 10.1186/1471-2105-16-S11-S8.Structural to functional synaptic conversion
US9165244 ; US2014108315 . 2015.Large Volume Imaging of Rodent Brain Anatomy with Emphasis on Selective Plane Illumination Microscopy
Lausanne, EPFL, 2015. DOI : 10.5075/epfl-thesis-6533.Reconstruction and Simulation of Neocortical Microcircuitry
Cell. 2015. DOI : 10.1016/j.cell.2015.09.029.The neocortical microcircuit collaboration portal: a resource for rat somatosensory cortex
Frontiers In Neural Circuits. 2015. DOI : 10.3389/fncir.2015.00044.Synaptic and cellular organization of layer 1 of the developing rat somatosensory cortex
Frontiers In Neuroanatomy. 2014. DOI : 10.3389/fnana.2013.00052.Visualizing the similarity and pedigree of NEURON ion channel models available on ModelDB
COSYNE 2014, Salt Lake City & Snowbird, Utah, USA, February 27 - March 4, 2014.The death of Cajal and the end of scientific romanticism and individualism
Trends In Neurosciences. 2014. DOI : 10.1016/j.tins.2014.08.002.OCTOPUS: Efficient Query Execution on Dynamic Mesh Datasets
2014. 30st International Conference on Data Engineering (ICDE '14), Chicago, USA, April, 2014.Scalable Exploration of Spatial Data in Large-Scale Scientific Simulations
Lausanne, EPFL, 2014. DOI : 10.5075/epfl-thesis-6125.Dampened neural activity and abolition of epileptic-like activity in cortical slices by active ingredients of spices
Scientific Reports. 2014. DOI : 10.1038/srep06825.Distributor of neurons in a neocortical column
US2014107992 . 2014.The In-Silico Neocortical Microcircuit : From Structure to Dynamics
Lausanne, EPFL, 2014. DOI : 10.5075/epfl-thesis-6168.Single-cell RT-PCR, a technique to decipher the electrical, anatomical, and genetic determinants of neuronal diversity
Patch-Clamp Methods and Protocols; Springer, 2014. p. 143 - 158.New insights into the classification and nomenclature of cortical GABAergic interneurons
Nature Reviews Neuroscience. 2013. DOI : 10.1038/nrn3444.A Hierarchical Structure of Cortical Interneuron Electrical Diversity Revealed by Automated Statistical Analysis
Cerebral Cortex. 2013. DOI : 10.1093/cercor/bhs290.General developmental health in the VPA-rat model of autism
Frontiers In Behavioral Neuroscience. 2013. DOI : 10.3389/fnbeh.2013.00088.Hyper-emotional neurophysiology in a rat model of autism
Lausanne, EPFL, 2013. DOI : 10.5075/epfl-thesis-5996.Computing the size and number of neuronal clusters in local circuits
Frontiers In Neuroanatomy. 2013. DOI : 10.3389/fnana.2013.00001.Correction: Effective Stimuli for Constructing Reliable Neuron Models
PLoS Computational Biology. 2013. DOI : 10.1371/annotation/c002fbe1-712c-4608-9747-f1185f0b7cf4.Preserving axosomatic spiking features despite diverse dendritic morphology
Journal Of Neurophysiology. 2013. DOI : 10.1152/jn.00048.2013.Seven challenges for neuroscience
Functional neurology. 2013. DOI : 10.11138/FNeur/2013.28.3.145.Neuroscience thinks big (and collaboratively)
Nature Reviews Neuroscience. 2013. DOI : 10.1038/nrn3578.A Biophysically Detailed Model of Neocortical Local Field Potentials Predicts the Critical Role of Active Membrane Currents
Neuron. 2013. DOI : 10.1016/j.neuron.2013.05.023.Synaptic and Cellular Organization of Layer 1 of the Developing Rat Somatosensory Cortex
Lausanne, EPFL, 2013. DOI : 10.5075/epfl-thesis-5902.Nlgn4 knockout induces network hypo-excitability in juvenile mouse somatosensory cortex in vitro
Scientific Reports. 2013. DOI : 10.1038/srep02897.A computer-assisted multi-electrode patch-clamp system
Journal of visualized experiments : JoVE. 2013. DOI : 10.3791/50630.Network Activity and Plasticity
Lausanne, EPFL, 2013. DOI : 10.5075/epfl-thesis-5901.One minute with ... Henry Markram
New Scientist. 2013.Matched Pre- and Post-Synaptic Changes Underlie Synaptic Plasticity over Long Time Scales
Journal Of Neuroscience. 2013. DOI : 10.1523/Jneurosci.3740-12.2013.Intrinsic morphological diversity of thick-tufted layer 5 pyramidal neurons ensures robust and invariant properties of in silico synaptic connections
The Journal of physiology. 2012. DOI : 10.1113/jphysiol.2011.219576.The human brain project
Scientific American. 2012.SCOUT: Prefetching for Latent Structure Following Queries
2012. 38th International Conference on Very Large Databases (VLDB '12), Istanbul, Turkey, August, 2012. p. 1531 - 1542. DOI : 10.14778/2350229.2350267.A neuron membrane mesh representation for visualization of electrophysiological simulations
IEEE transactions on visualization and computer graphics. 2012. DOI : 10.1109/TVCG.2011.55.Combinatorial expression rules of ion channel genes in juvenile rat (Rattus norvegicus) neocortical neurons
PloS One. 2012. DOI : 10.1371/journal.pone.0034786.Short-term ionic plasticity at GABAergic synapses
Frontiers in synaptic neuroscience. 2012. DOI : 10.3389/fnsyn.2012.00005.Statistical connectivity provides a sufficient foundation for specific functional connectivity in neocortical neural microcircuits
Proceedings Of The National Academy Of Sciences Of The United States Of America (PNAS). 2012. DOI : 10.1073/pnas.1202128109.The neocortical column
Frontiers In Neuroanatomy. 2012. DOI : 10.3389/fnana.2012.00022.Spike-timing-dependent plasticity: a comprehensive overview
Frontiers in synaptic neuroscience. 2012. DOI : 10.3389/fnsyn.2012.00002.Innate neural assemblies for lego memory
Frontiers in neural circuits. 2011. DOI : 10.3389/fncir.2011.00006.Effective Stimuli for Constructing Reliable Neuron Models
Plos Computational Biology. 2011. DOI : 10.1371/journal.pcbi.1002133.Morphological development of thick-tufted layer v pyramidal cells in the rat somatosensory cortex
Frontiers in neuroanatomy. 2011. DOI : 10.3389/fnana.2011.00005.Frontiers research : seek, share & create
Common knowledge : the challenge of transdisciplinarity; Lausanne, Switzerland: EPFL Press, 2011. p. 145 - 162.A Pipeline Based Approach for Experimental Neuroscience Data Management
Lausanne, EPFL, 2011. DOI : 10.5075/epfl-thesis-4863.Engineering Neuron Models : from Ion Channels to Electrical Behavior
Lausanne, EPFL, 2011. DOI : 10.5075/epfl-thesis-5129.A history of spike-timing-dependent plasticity
Frontiers in Synaptic Neuroscience. 2011. DOI : 10.3389/fnsyn.2011.00004.Predictive Engineering the Membrane Composition of Neocortical Neurons
Lausanne, EPFL, 2011. DOI : 10.5075/epfl-thesis-5067.A synaptic organizing principle for cortical neuronal groups
Proceedings Of The National Academy Of Sciences Of The United States Of America (PNAS). 2011. DOI : 10.1073/pnas.1016051108.Organizing neural networks
US11900237 ; US2023394280 ; US2022121907 ; US11126911 ; US2019354841 ; US10387767 ; US10373048 ; KR101816329 ; DK2531959 ; EP2531959 ; CN102859538 ; JP5844286 ; US2015363689 ; JP2013519140 ; CN102859538 ; US2012323833 ; EP2531959 ; KR20120123698 ; WO2011095342 . 2011.Encoding and decoding of information
ES2823253 ; EP3771103 ; EP2460276 ; CN104901702 ; KR101734596 ; JP5848414 ; CN104901702 ; CN102648582 ; US8941512 ; JP2014209794 ; JP5587412 ; JP2013500660 ; US2012313798 ; US8253607 ; CN102648582 ; EP2460276 ; US2012119926 ; KR20120046760 ; US8159373 ; WO2011012614 ; WO2011012158 ; WO2011012614 ; US2011025532 . 2011.Models of neocortical layer 5b pyramidal cells capturing a wide range of dendritic and perisomatic active properties
PLoS computational biology. 2011. DOI : 10.1371/journal.pcbi.1002107.Augmenting cognition
Lausanne: EPFL Press.Introducing the Human Brain Project
2011. 2nd European Future Technologies Conference and Exhibition (FET), Budapest, HUNGARY, May 04-06, 2011. p. 39 - 42. DOI : 10.1016/j.procs.2011.12.015.Ephaptic coupling of cortical neurons
Nature neuroscience. 2011. DOI : 10.1038/nn.2727.Channelpedia: an integrative and interactive database for ion channels
Frontiers in neuroinformatics. 2011. DOI : 10.3389/fninf.2011.00036.Newsmaker interview: Heny Markram Blue Brain founder responds to critics, clarifies his goals
Science. 2011. DOI : 10.1126/science.334.6057.748.Emergent Properties of in silico Synaptic Transmission in a Model of the Rat Neocortical Column
Lausanne, EPFL, 2011. DOI : 10.5075/epfl-thesis-5208.Emergent Connectivity Principles in the Neocortex
Lausanne, EPFL, 2010. DOI : 10.5075/epfl-thesis-4631.Impact of Carbon-Nanotube Substrate Coating in Neuronal Networks
Lausanne, EPFL, 2010. DOI : 10.5075/epfl-thesis-4713.Emergent Dynamics in Neocortical Microcircuits
Lausanne, EPFL, 2010. DOI : 10.5075/epfl-thesis-4705.Diminished activity-dependent brain-derived neurotrophic factor expression underlies cortical neuron microcircuit hypoconnectivity resulting from exposure to mutant huntingtin fragments
The Journal of pharmacology and experimental therapeutics. 2010. DOI : 10.1124/jpet.110.167551.Brief Bursts Self-Inhibit and Correlate the Pyramidal Network
Plos Biology. 2010. DOI : 10.1371/journal.pbio.1000473.The intense world theory - a unifying theory of the neurobiology of autism
Frontiers in human neuroscience. 2010. DOI : 10.3389/fnhum.2010.00224.Carbon nanotubes might improve neuronal performance by favouring electrical shortcuts
Nature Nanotechnology. 2009. DOI : 10.1038/NNANO.2008.374.Structure and function of the olfactory bulb microcircuit
Lausanne, EPFL, 2009. DOI : 10.5075/epfl-thesis-4275.Multiquantal release underlies the distribution of synaptic efficacies in the neocortex
Frontiers in computational neuroscience. 2009. DOI : 10.3389/neuro.10.027.2009.Enhanced long-term microcircuit plasticity in the valproic Acid animal model of autism
Frontiers in synaptic neuroscience. 2009. DOI : 10.3389/neuro.19.001.2009.Frequency-dependent disynaptic inhibition in the pyramidal network: a ubiquitous pathway in the developing rat neocortex
Journal Of Physiology-London. 2009. DOI : 10.1113/jphysiol.2009.176552.Properties of neocortical microcircuits
Lausanne, EPFL, 2009. DOI : 10.5075/epfl-thesis-4454.A Component-Based Extension Framework for Large-Scale Parallel Simulations in NEURON
Frontiers in neuroinformatics. 2009. DOI : 10.3389/neuro.11.010.2009.Slow oscillations in neural networks with facilitating synapses
Journal of computational neuroscience. 2008. DOI : 10.1007/s10827-008-0080-z.Inferring connection proximity in networks of electrically coupled cells by subthreshold frequency response analysis
J Comput Neurosci. 2008. DOI : 10.1007/s10827-007-0058-2.Petilla terminology: nomenclature of features of GABAergic interneurons of the cerebral cortex
Nature Reviews Neuroscience. 2008. DOI : 10.1038/nrn2402.Fully implicit parallel simulation of single neurons
Journal of computational neuroscience. 2008. DOI : 10.1007/s10827-008-0087-5.Minimal Hodgkin-Huxley type models for different classes of cortical and thalamic neurons
Biological cybernetics. 2008. DOI : 10.1007/s00422-008-0263-8.Identifying, tabulating, and analyzing contacts between branched neuron morphologies
IBM Journal of Research and Development. 2008. DOI : 10.1147/rd.521.0043.Evaluating automated parameter constraining procedures of neuron models by experimental and surrogate data
Biological cybernetics. 2008. DOI : 10.1007/s00422-008-0269-2.Fixing the location and dimensions of functional neocortical columns
HFSP journal. 2008. DOI : 10.2976/1.2919545.Hyper-connectivity and hyper-plasticity in the medial prefrontal cortex in the valproic Acid animal model of autism
Frontiers in neural circuits. 2008. DOI : 10.3389/neuro.04.004.2008.Abnormal fear conditioning and amygdala processing in an animal model of autism
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